Gene annotation
Transcriptome id Sobic.003G268900.1
Synonym MAPKKK17, Sb03g032140
Functional annotation STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1W0VZ51
Pfam PF00069
Panther DB PTHR24361 PTHR24361:SF391
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G26890 : mitogen-activated protein kinase kinase kinase 16
RAP-DB (Rice) LOC_Os01g50410.1 : STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a027899 , Zm00025a027897 , Zm00025a027901 , Zm00025a027900 , Zm00025a038904 , Zm00025a044434
Brachypodium PNT72663 , KQK05073 , KQK05074
Barley HORVU3Hr1G065610.1 , HORVU3Hr1G065630.1 , HORVU3Hr1G065640.1 , HORVU3Hr1G065630.2 , HORVU1Hr1G078860.4 , HORVU1Hr1G078860.5 , HORVU1Hr1G078860.2 , HORVU1Hr1G078860.3
Wheat TraesCS3B02G288300
Populus -


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cDNA sequences
Sobic.003G268900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
2 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
8 Sobic.009G167000 expressed protein -
9 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
10 Sobic.009G068900 WRKY67, expressed -
11 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
12 Sobic.007G051800 down-regulated TF in developmental senescence(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
13 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
14 Sobic.008G058900 amino acid transporter, putative, expressed -
15 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
17 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
18 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
19 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
20 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G268900 Sobic003G268900 Sobic004G244100 Sobic004G244100 Sobic003G268900--Sobic004G244100 Sobic001G095700 Sobic001G095700 Sobic003G268900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic003G268900--Sobic002G367900 Sobic002G217100 Sobic002G217100 Sobic003G268900--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic003G268900--Sobic006G210300 Sobic002G197600 Sobic002G197600 Sobic003G268900--Sobic002G197600 Sobic004G244300 Sobic004G244300 Sobic003G268900--Sobic004G244300 Sobic009G167000 Sobic009G167000 Sobic003G268900--Sobic009G167000 Sobic004G281200 Sobic004G281200 Sobic003G268900--Sobic004G281200 Sobic004G244100--Sobic003G268900 Sobic006G194600 Sobic006G194600 Sobic004G244100--Sobic006G194600 Sobic004G244100--Sobic004G244300 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic010G016500 Sobic010G016500 Sobic004G244100--Sobic010G016500 Sobic004G244100--Sobic002G217100 Sobic006G203000 Sobic006G203000 Sobic004G244100--Sobic006G203000 Sobic006G026400 Sobic006G026400 Sobic004G244100--Sobic006G026400 Sobic004G065900 Sobic004G065900 Sobic001G095700--Sobic004G065900 Sobic001G095700--Sobic003G268900 Sobic002G294600 Sobic002G294600 Sobic001G095700--Sobic002G294600 Sobic001G095700--Sobic002G367900 Sobic007G145700 Sobic007G145700 Sobic001G095700--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic001G095700--Sobic006G273800 Sobic007G051800 Sobic007G051800 Sobic001G095700--Sobic007G051800 Sobic001G064900 Sobic001G064900 Sobic001G095700--Sobic001G064900 Sobic003G341100 Sobic003G341100 Sobic001G095700--Sobic003G341100 Sobic002G207300 Sobic002G207300 Sobic002G367900--Sobic002G207300 Sobic002G367900--Sobic004G065900 Sobic002G367900--Sobic003G268900 Sobic002G367900--Sobic001G095700 Sobic001G462800 Sobic001G462800 Sobic002G367900--Sobic001G462800 Sobic002G367900--Sobic002G294600 Sobic002G367900--Sobic002G197600 Sobic002G367900--Sobic006G210300 Sobic002G367900--Sobic004G244100 Sobic002G217100--Sobic006G210300 Sobic001G081600 Sobic001G081600 Sobic002G217100--Sobic001G081600 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G217100--Sobic002G197600 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic002G217100--Sobic009G167000 Sobic002G217100--Sobic004G244100 Sobic006G210300--Sobic002G217100 Sobic006G210300--Sobic004G281200 Sobic006G210300--Sobic001G081600 Sobic006G210300--Sobic002G197600 Sobic006G210300--Sobic001G462800 Sobic006G210300--Sobic002G367900 Sobic006G210300--Sobic010G016500 Sobic006G210300--Sobic004G244100 Sobic006G184400 Sobic006G184400 Sobic006G210300--Sobic006G184400 Sobic002G197600--Sobic001G081600 Sobic002G197600--Sobic002G217100 Sobic002G197600--Sobic001G462800 Sobic002G197600--Sobic004G281200 Sobic002G197600--Sobic006G210300 Sobic002G197600--Sobic002G367900 Sobic008G036000 Sobic008G036000 Sobic002G197600--Sobic008G036000 Sobic002G197600--Sobic004G244100 Sobic004G176900 Sobic004G176900 Sobic002G197600--Sobic004G176900 Sobic004G244300--Sobic004G281200 Sobic004G244300--Sobic006G194600 Sobic004G244300--Sobic010G016500 Sobic004G244300--Sobic006G203000 Sobic004G244300--Sobic004G244100 Sobic004G244300--Sobic009G167000 Sobic004G244300--Sobic002G217100 Sobic002G037400 Sobic002G037400 Sobic004G244300--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic004G244300--Sobic001G075101 Sobic002G021300 Sobic002G021300 Sobic009G167000--Sobic002G021300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G076500 Sobic009G076500 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic008G059000 Sobic008G059000 Sobic009G167000--Sobic008G059000 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100
Octagon: transcription factors


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