Gene annotation
Transcriptome id Sobic.004G244300.1
Synonym FH8, ATFH8
Functional annotation formin-like protein 3 precursor, putative, expressed
UniProt C5XZ72
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF239
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70140 : formin 8
RAP-DB (Rice) LOC_Os02g50570.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a021976
Brachypodium KQK02006
Barley HORVU6Hr1G076870.10 , HORVU6Hr1G076870.8 , HORVU6Hr1G076870.9 , HORVU6Hr1G076870.4
Wheat TraesCS6A02G312000 , TraesCS6A02G312000 , TraesCS6D02G291400 , TraesCS6B02G342200
Populus -


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cDNA sequences
Sobic.004G244300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
2 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
3 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
4 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
5 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.009G167000 expressed protein -
7 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
9 Sobic.001G075101 - -
10 Sobic.006G026400 - -
11 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
12 Sobic.006G078300 - -
13 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
15 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
16 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.009G076500 expressed protein -
19 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
20 Sobic.002G023900 Homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic004G244300 Sobic004G244300 Sobic004G281200 Sobic004G281200 Sobic004G244300--Sobic004G281200 Sobic006G194600 Sobic006G194600 Sobic004G244300--Sobic006G194600 Sobic010G016500 Sobic010G016500 Sobic004G244300--Sobic010G016500 Sobic006G203000 Sobic006G203000 Sobic004G244300--Sobic006G203000 Sobic004G244100 Sobic004G244100 Sobic004G244300--Sobic004G244100 Sobic009G167000 Sobic009G167000 Sobic004G244300--Sobic009G167000 Sobic002G217100 Sobic002G217100 Sobic004G244300--Sobic002G217100 Sobic002G037400 Sobic002G037400 Sobic004G244300--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic004G244300--Sobic001G075101 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic008G059000 Sobic008G059000 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic004G281200--Sobic006G210300 Sobic001G081600 Sobic001G081600 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic006G194600--Sobic004G244300 Sobic006G026400 Sobic006G026400 Sobic006G194600--Sobic006G026400 Sobic006G194600--Sobic004G244100 Sobic006G194600--Sobic010G016500 Sobic006G194600--Sobic004G281200 Sobic006G194600--Sobic006G203000 Sobic006G194600--Sobic009G167000 Sobic006G194600--Sobic002G037400 Sobic006G194600--Sobic008G059000 Sobic010G016500--Sobic004G281200 Sobic010G016500--Sobic004G244300 Sobic010G016500--Sobic006G194600 Sobic010G016500--Sobic006G203000 Sobic004G283300 Sobic004G283300 Sobic010G016500--Sobic004G283300 Sobic010G016500--Sobic002G217100 Sobic010G016500--Sobic004G244100 Sobic010G016500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic010G016500--Sobic002G182800 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic002G110200 Sobic002G110200 Sobic006G203000--Sobic002G110200 Sobic003G268900 Sobic003G268900 Sobic004G244100--Sobic003G268900 Sobic004G244100--Sobic006G194600 Sobic004G244100--Sobic004G244300 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic004G244100--Sobic010G016500 Sobic004G244100--Sobic002G217100 Sobic004G244100--Sobic006G203000 Sobic004G244100--Sobic006G026400 Sobic002G021300 Sobic002G021300 Sobic009G167000--Sobic002G021300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G076500 Sobic009G076500 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic001G462800 Sobic001G462800 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G197600 Sobic002G197600 Sobic002G217100--Sobic002G197600 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic002G217100--Sobic009G167000 Sobic002G217100--Sobic004G244100 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic007G143100 Sobic007G143100 Sobic002G037400--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic002G037400--Sobic005G016900 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G509400 Sobic001G509400 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800
Octagon: transcription factors


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