Gene annotation
Transcriptome id Sobic.001G050800.1
Synonym Sb01g004660
Functional annotation galactosyltransferase family protein, putative, expressed
UniProt C5WX08
Pfam PF02434 PF00337
Panther DB PTHR11214 PTHR11214:SF119
NCBI CDD KOG2287; Galactosyltransferases
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016020membrane GO:0008378galactosyltransferase activity GO:0006486protein glycosylation


Orthologs (automatic annotation)
TAIR AT5G62620 : Galactosyltransferase family protein
RAP-DB (Rice) LOC_Os03g58900.1 : galactosyltransferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008618
Brachypodium KQK20460 , KQK12630
Barley HORVU1Hr1G005680.2 , HORVU1Hr1G005680.1 , HORVU1Hr1G005680.6 , HORVU1Hr1G005680.7 , HORVU1Hr1G005680.4 , HORVU1Hr1G005680.5 , HORVU1Hr1G005680.8 , HORVU1Hr1G005680.9 , HORVU1Hr1G005680.3
Wheat TraesCS1A02G036300 , TraesCS1D02G038000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
2 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
3 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
4 Sobic.006G026400 - -
5 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
6 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
7 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
8 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
10 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
11 Sobic.009G167000 expressed protein -
12 Sobic.009G030200 homeobox protein knotted-1-like 6, putative, expressed -
13 Sobic.009G076500 expressed protein -
14 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
15 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
17 Sobic.002G023900 Homeobox domain containing protein, expressed -
18 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -


Gene co-expression network
sample Sobic001G050800 Sobic001G050800 Sobic001G157400 Sobic001G157400 Sobic001G050800--Sobic001G157400 Sobic009G170100 Sobic009G170100 Sobic001G050800--Sobic009G170100 Sobic006G194600 Sobic006G194600 Sobic001G050800--Sobic006G194600 Sobic006G026400 Sobic006G026400 Sobic001G050800--Sobic006G026400 Sobic006G032200 Sobic006G032200 Sobic001G050800--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic001G050800--Sobic004G281200 Sobic004G244300 Sobic004G244300 Sobic001G050800--Sobic004G244300 Sobic004G244100 Sobic004G244100 Sobic001G050800--Sobic004G244100 Sobic002G068800 Sobic002G068800 Sobic001G050800--Sobic002G068800 Sobic001G157400--Sobic001G050800 Sobic002G023900 Sobic002G023900 Sobic001G157400--Sobic002G023900 Sobic001G157400--Sobic006G026400 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic001G157400--Sobic006G032200 Sobic006G078300 Sobic006G078300 Sobic001G157400--Sobic006G078300 Sobic001G157400--Sobic009G170100 Sobic009G170100--Sobic006G032200 Sobic004G283300 Sobic004G283300 Sobic009G170100--Sobic004G283300 Sobic009G170100--Sobic001G050800 Sobic009G170100--Sobic004G281200 Sobic001G081600 Sobic001G081600 Sobic009G170100--Sobic001G081600 Sobic001G063600 Sobic001G063600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic002G344700 Sobic002G344700 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic006G194600--Sobic004G244300 Sobic006G194600--Sobic006G026400 Sobic006G194600--Sobic004G244100 Sobic006G194600--Sobic010G016500 Sobic006G194600--Sobic004G281200 Sobic006G203000 Sobic006G203000 Sobic006G194600--Sobic006G203000 Sobic009G167000 Sobic009G167000 Sobic006G194600--Sobic009G167000 Sobic002G037400 Sobic002G037400 Sobic006G194600--Sobic002G037400 Sobic008G059000 Sobic008G059000 Sobic006G194600--Sobic008G059000 Sobic006G026400--Sobic002G037400 Sobic006G026400--Sobic006G203000 Sobic006G026400--Sobic006G194600 Sobic007G169600 Sobic007G169600 Sobic006G026400--Sobic007G169600 Sobic001G075101 Sobic001G075101 Sobic006G026400--Sobic001G075101 Sobic009G076700 Sobic009G076700 Sobic006G026400--Sobic009G076700 Sobic009G076500 Sobic009G076500 Sobic006G026400--Sobic009G076500 Sobic003G083000 Sobic003G083000 Sobic006G026400--Sobic003G083000 Sobic006G026400--Sobic004G244100 Sobic006G032200--Sobic009G170100 Sobic006G032200--Sobic004G283300 Sobic006G032200--Sobic002G037400 Sobic006G032200--Sobic006G203000 Sobic006G032200--Sobic004G281200 Sobic006G032200--Sobic002G344700 Sobic009G128300 Sobic009G128300 Sobic006G032200--Sobic009G128300 Sobic006G032200--Sobic001G075101 Sobic006G032200--Sobic010G016500 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic004G281200--Sobic006G203000 Sobic002G217100 Sobic002G217100 Sobic004G281200--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic004G244300--Sobic004G281200 Sobic004G244300--Sobic006G194600 Sobic004G244300--Sobic010G016500 Sobic004G244300--Sobic006G203000 Sobic004G244300--Sobic004G244100 Sobic004G244300--Sobic009G167000 Sobic004G244300--Sobic002G217100 Sobic004G244300--Sobic002G037400 Sobic004G244300--Sobic001G075101 Sobic003G268900 Sobic003G268900 Sobic004G244100--Sobic003G268900 Sobic004G244100--Sobic006G194600 Sobic004G244100--Sobic004G244300 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic004G244100--Sobic010G016500 Sobic004G244100--Sobic002G217100 Sobic004G244100--Sobic006G203000 Sobic004G244100--Sobic006G026400 Sobic002G068800--Sobic001G063600 Sobic002G068800--Sobic001G157400 Sobic002G068800--Sobic001G050800 Sobic002G068800--Sobic009G170100 Sobic002G068800--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic002G068800--Sobic002G197600 Sobic010G272101 Sobic010G272101 Sobic002G068800--Sobic010G272101 Sobic001G476400 Sobic001G476400 Sobic002G068800--Sobic001G476400 Sobic002G068800--Sobic004G281200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.