Gene annotation
Transcriptome id Sobic.001G157400.1
Synonym ATHB14, PHB-1, PHB, ATHB-14, PHB-1D, Sb01g013710
Functional annotation Class III HD ZIP family protein (PubMedID : 23915383)
START domain containing protein, expressed
UniProt C5WR86
Pfam PF00046 PF08670 PF01852
Panther DB PTHR24326 PTHR24326:SF156
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0003677; DNA binding GO:0008289lipid binding


Orthologs (automatic annotation)
TAIR AT2G34710 : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
RAP-DB (Rice) LOC_Os03g43930.2 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000157 , Zm00025a004679 , Zm00025a007298 , Zm00025a025364 , Zm00025a053557 , Zm00025a035846 , Zm00025a017264
Brachypodium KQK03195 , KQK14011 , KQJ85820
Barley HORVU5Hr1G010650.1 , HORVU0Hr1G010160.1 , HORVU3Hr1G026990.31 , HORVU3Hr1G026990.30 , HORVU3Hr1G026990.33 , HORVU3Hr1G026990.32 , HORVU3Hr1G026990.35 , HORVU3Hr1G026990.34 , HORVU3Hr1G026990.37 , HORVU5Hr1G093150.20 , HORVU3Hr1G026990.9 , HORVU3Hr1G026990.7 , HORVU3Hr1G026990.3 , HORVU3Hr1G026990.2 , HORVU3Hr1G026990.1 , HORVU5Hr1G093150.5 , HORVU5Hr1G093150.4 , HORVU5Hr1G093150.7 , HORVU5Hr1G093150.6 , HORVU5Hr1G093150.1 , HORVU5Hr1G093150.3 , HORVU5Hr1G093150.2 , HORVU0Hr1G010250.6 , HORVU0Hr1G010250.4 , HORVU0Hr1G010250.5 , HORVU0Hr1G010250.2 , HORVU0Hr1G010250.3 , HORVU0Hr1G010250.1 , HORVU3Hr1G026990.28 , HORVU3Hr1G026990.29 , HORVU3Hr1G026990.22 , HORVU3Hr1G026990.23 , HORVU3Hr1G026990.20 , HORVU3Hr1G026990.21 , HORVU5Hr1G093150.11 , HORVU5Hr1G093150.10 , HORVU5Hr1G093150.13 , HORVU5Hr1G093150.12 , HORVU5Hr1G093150.15 , HORVU5Hr1G093150.14 , HORVU5Hr1G093150.17 , HORVU5Hr1G093150.16 , HORVU5Hr1G093150.19 , HORVU5Hr1G093150.18 , HORVU3Hr1G026990.27 , HORVU3Hr1G026990.24 , HORVU3Hr1G026990.17 , HORVU3Hr1G026990.11 , HORVU3Hr1G026990.6 , HORVU5Hr1G093150.9 , HORVU5Hr1G093150.8 , HORVU3Hr1G026990.40 , HORVU3Hr1G026990.41
Wheat TraesCS5B02G047200 , TraesCS5D02G385300 , TraesCS3B02G159100 , TraesCS3B02G159100 , TraesCS5A02G043400 , TraesCS5D02G052300 , TraesCS5B02G378000 , TraesCS3A02G312800 , TraesCS3A02G312800 , TraesCS3D02G141500 , TraesCS3D02G141500 , TraesCS5A02G375800
Populus PNS92629 , PNS92626 , PNS92627 , PNS92628 , PNT55370 , PNT55371 , PNT55373 , PNT33396 , PNT33397


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
2 Sobic.002G023900 Homeobox domain containing protein, expressed -
3 Sobic.006G026400 - -
4 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
5 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
6 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
8 Sobic.006G078300 - -
9 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
10 Sobic.009G030200 homeobox protein knotted-1-like 6, putative, expressed -
11 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
12 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
13 Sobic.001G075101 - -
14 Sobic.003G144200 Homeobox domain containing protein, expressed -
15 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
16 Sobic.009G099000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
17 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
18 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
19 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
20 Sobic.009G159900 homeodomain protein, putative, expressed -


Gene co-expression network
sample Sobic001G157400 Sobic001G157400 Sobic001G050800 Sobic001G050800 Sobic001G157400--Sobic001G050800 Sobic002G023900 Sobic002G023900 Sobic001G157400--Sobic002G023900 Sobic006G026400 Sobic006G026400 Sobic001G157400--Sobic006G026400 Sobic002G068800 Sobic002G068800 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic006G032200 Sobic006G032200 Sobic001G157400--Sobic006G032200 Sobic006G078300 Sobic006G078300 Sobic001G157400--Sobic006G078300 Sobic009G170100 Sobic009G170100 Sobic001G157400--Sobic009G170100 Sobic001G050800--Sobic001G157400 Sobic001G050800--Sobic009G170100 Sobic006G194600 Sobic006G194600 Sobic001G050800--Sobic006G194600 Sobic001G050800--Sobic006G026400 Sobic001G050800--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic001G050800--Sobic004G281200 Sobic004G244300 Sobic004G244300 Sobic001G050800--Sobic004G244300 Sobic004G244100 Sobic004G244100 Sobic001G050800--Sobic004G244100 Sobic001G050800--Sobic002G068800 Sobic001G075101 Sobic001G075101 Sobic002G023900--Sobic001G075101 Sobic006G203000 Sobic006G203000 Sobic002G023900--Sobic006G203000 Sobic007G153001 Sobic007G153001 Sobic002G023900--Sobic007G153001 Sobic002G037400 Sobic002G037400 Sobic002G023900--Sobic002G037400 Sobic007G169600 Sobic007G169600 Sobic002G023900--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic002G023900--Sobic003G083000 Sobic002G331450 Sobic002G331450 Sobic002G023900--Sobic002G331450 Sobic003G040800 Sobic003G040800 Sobic002G023900--Sobic003G040800 Sobic001G106000 Sobic001G106000 Sobic002G023900--Sobic001G106000 Sobic006G026400--Sobic002G037400 Sobic006G026400--Sobic006G203000 Sobic006G026400--Sobic006G194600 Sobic006G026400--Sobic007G169600 Sobic006G026400--Sobic001G075101 Sobic009G076700 Sobic009G076700 Sobic006G026400--Sobic009G076700 Sobic009G076500 Sobic009G076500 Sobic006G026400--Sobic009G076500 Sobic006G026400--Sobic003G083000 Sobic006G026400--Sobic004G244100 Sobic001G063600 Sobic001G063600 Sobic002G068800--Sobic001G063600 Sobic002G068800--Sobic001G157400 Sobic002G068800--Sobic001G050800 Sobic002G068800--Sobic009G170100 Sobic001G081600 Sobic001G081600 Sobic002G068800--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic002G068800--Sobic002G197600 Sobic010G272101 Sobic010G272101 Sobic002G068800--Sobic010G272101 Sobic001G476400 Sobic001G476400 Sobic002G068800--Sobic001G476400 Sobic002G068800--Sobic004G281200 Sobic009G099000 Sobic009G099000 Sobic003G278700--Sobic009G099000 Sobic003G278700--Sobic001G157400 Sobic001G460300 Sobic001G460300 Sobic003G278700--Sobic001G460300 Sobic003G278700--Sobic001G050800 Sobic005G231700 Sobic005G231700 Sobic003G278700--Sobic005G231700 Sobic009G030200 Sobic009G030200 Sobic003G278700--Sobic009G030200 Sobic003G278700--Sobic010G272101 Sobic003G278700--Sobic001G063600 Sobic003G278700--Sobic003G227600 Sobic009G128300 Sobic009G128300 Sobic003G227600--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic003G227600--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic003G227600--Sobic003G233900 Sobic002G182800 Sobic002G182800 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G227600--Sobic002G342100 Sobic001G509400 Sobic001G509400 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic006G032200--Sobic009G170100 Sobic004G283300 Sobic004G283300 Sobic006G032200--Sobic004G283300 Sobic006G032200--Sobic002G037400 Sobic006G032200--Sobic006G203000 Sobic006G032200--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic006G032200--Sobic002G344700 Sobic006G032200--Sobic009G128300 Sobic006G032200--Sobic001G075101 Sobic010G016500 Sobic010G016500 Sobic006G032200--Sobic010G016500 Sobic006G078300--Sobic010G016500 Sobic006G078300--Sobic004G244300 Sobic006G078300--Sobic006G203000 Sobic006G078300--Sobic001G075101 Sobic006G078300--Sobic004G281200 Sobic006G078300--Sobic006G194600 Sobic006G078300--Sobic001G509400 Sobic006G078350 Sobic006G078350 Sobic006G078300--Sobic006G078350 Sobic006G078300--Sobic001G157400 Sobic009G170100--Sobic006G032200 Sobic009G170100--Sobic004G283300 Sobic009G170100--Sobic001G050800 Sobic009G170100--Sobic004G281200 Sobic009G170100--Sobic001G081600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic009G170100--Sobic002G344700 Sobic009G170100--Sobic010G016500
Octagon: transcription factors


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