Gene annotation
Transcriptome id Sobic.007G169600.1
Synonym Sb07g024210
Functional annotation L1P family of ribosomal proteins domain containing protein, expressed
UniProt -
Pfam PF00687
Panther DB PTHR23105 PTHR23105:SF44
NCBI CDD KOG1570; 60S ribosomal protein L10A
KEGG Orthology K02865; RP-L10Ae, large subunit ribosomal protein L10Ae
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08360 : Ribosomal protein L1p/L10e family
RAP-DB (Rice) LOC_Os08g44380.1 : L1P family of ribosomal proteins domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044113 , Zm00025a038585 , Zm00025a030557 , Zm00025a010459 , Zm00025a005609
Brachypodium KQJ99358 , KQJ99359 , KQK10701 , KQJ91586 , KQJ99355 , KQJ99356 , KQJ99357
Barley HORVU7Hr1G059090.4 , HORVU7Hr1G059090.5 , HORVU7Hr1G059090.6 , HORVU7Hr1G059090.7 , HORVU7Hr1G059090.1 , HORVU7Hr1G059090.2 , HORVU7Hr1G059090.3 , HORVU4Hr1G001350.8 , HORVU4Hr1G001350.9 , HORVU4Hr1G001350.3 , HORVU4Hr1G001350.2 , HORVU7Hr1G059090.8 , HORVU7Hr1G059090.9 , HORVU4Hr1G001350.7 , HORVU4Hr1G001350.6 , HORVU4Hr1G001350.1 , HORVU4Hr1G001350.5 , HORVU4Hr1G001350.15 , HORVU4Hr1G001350.14 , HORVU4Hr1G001350.17 , HORVU4Hr1G001350.16 , HORVU4Hr1G001350.11 , HORVU4Hr1G001350.10 , HORVU4Hr1G001350.13 , HORVU4Hr1G001350.12
Wheat TraesCS4B02G007300 , TraesCS7B02G176600 , TraesCS3A02G372600 , TraesCS3A02G372600 , TraesCS4D02G007500 , TraesCS4D02G007500 , TraesCS4A02G305300 , TraesCS7D02G278500 , TraesCS7A02G278700
Populus -


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cDNA sequences
Sobic.007G169600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G075101 - -
2 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.002G331450 - -
4 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
5 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
6 Sobic.005G016900 CRP11 - Cysteine-rich family protein precursor, expressed -
7 Sobic.007G143100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
8 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
9 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
10 Sobic.009G076700 expressed protein -
11 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
12 Sobic.007G153001 - -
13 Sobic.007G073750 - -
14 Sobic.002G182800 expressed protein -
15 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.002G342100 no apical meristem protein, putative, expressed -
17 Sobic.001G509400 - -
18 Sobic.009G128300 CUE domain containing protein, expressed -
19 Sobic.002G023900 Homeobox domain containing protein, expressed -
20 Sobic.006G026400 - -


Gene co-expression network
sample Sobic007G169600 Sobic007G169600 Sobic001G075101 Sobic001G075101 Sobic007G169600--Sobic001G075101 Sobic003G083000 Sobic003G083000 Sobic007G169600--Sobic003G083000 Sobic002G331450 Sobic002G331450 Sobic007G169600--Sobic002G331450 Sobic002G037400 Sobic002G037400 Sobic007G169600--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic007G169600--Sobic006G203000 Sobic005G016900 Sobic005G016900 Sobic007G169600--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic007G169600--Sobic007G143100 Sobic002G325600 Sobic002G325600 Sobic007G169600--Sobic002G325600 Sobic007G143200 Sobic007G143200 Sobic007G169600--Sobic007G143200 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G509400 Sobic001G509400 Sobic001G075101--Sobic001G509400 Sobic002G182800 Sobic002G182800 Sobic001G075101--Sobic002G182800 Sobic003G083000--Sobic007G169600 Sobic003G083000--Sobic001G075101 Sobic003G083000--Sobic002G331450 Sobic003G083000--Sobic002G037400 Sobic003G083000--Sobic006G203000 Sobic003G083000--Sobic005G016900 Sobic003G083000--Sobic007G143100 Sobic003G083000--Sobic002G325600 Sobic003G083000--Sobic007G143200 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic002G331450--Sobic003G083000 Sobic002G110200 Sobic002G110200 Sobic002G331450--Sobic002G110200 Sobic002G331450--Sobic006G203000 Sobic002G331450--Sobic002G037400 Sobic009G128300 Sobic009G128300 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic006G026400 Sobic006G026400 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic002G037400--Sobic007G143100 Sobic002G037400--Sobic005G016900 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic006G203000--Sobic002G331450 Sobic006G203000--Sobic003G083000 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic005G016900--Sobic007G143100 Sobic007G073750 Sobic007G073750 Sobic005G016900--Sobic007G073750 Sobic005G016900--Sobic007G143200 Sobic005G016900--Sobic009G076700 Sobic003G397400 Sobic003G397400 Sobic005G016900--Sobic003G397400 Sobic005G016900--Sobic007G169600 Sobic005G016900--Sobic003G083000 Sobic005G016900--Sobic002G037400 Sobic005G016900--Sobic001G075101 Sobic007G143100--Sobic007G143200 Sobic007G143100--Sobic005G016900 Sobic007G143100--Sobic007G073750 Sobic007G143100--Sobic009G076700 Sobic007G143100--Sobic003G397400 Sobic007G143100--Sobic007G169600 Sobic007G143100--Sobic003G083000 Sobic007G143100--Sobic002G037400 Sobic007G143100--Sobic001G075101 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic002G325600--Sobic001G075101 Sobic002G325600--Sobic003G083000 Sobic002G325600--Sobic006G203000 Sobic002G325600--Sobic002G037400 Sobic002G325600--Sobic001G509400 Sobic002G325600--Sobic005G016900 Sobic002G325600--Sobic007G143100 Sobic007G143200--Sobic007G143100 Sobic007G143200--Sobic005G016900 Sobic007G143200--Sobic007G073750 Sobic007G143200--Sobic009G076700 Sobic007G143200--Sobic003G397400 Sobic007G143200--Sobic007G169600 Sobic007G143200--Sobic003G083000 Sobic007G143200--Sobic002G037400 Sobic007G143200--Sobic001G075101
Octagon: transcription factors


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