Gene annotation
Transcriptome id Sobic.002G331450.1
Synonym -
Functional annotation -
UniProt A0A1W0W6S0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
2 Sobic.001G075101 - -
3 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
4 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
5 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
8 Sobic.009G128300 CUE domain containing protein, expressed -
9 Sobic.002G182800 expressed protein -
10 Sobic.001G509400 - -
11 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.002G342100 no apical meristem protein, putative, expressed -
13 Sobic.004G211301 - -
14 Sobic.005G016900 CRP11 - Cysteine-rich family protein precursor, expressed -
15 Sobic.007G143100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
16 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.007G153001 - -
18 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
19 Sobic.003G252400 drought induced 19 protein, putative, expressed -
20 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -


Gene co-expression network
sample Sobic002G331450 Sobic002G331450 Sobic007G169600 Sobic007G169600 Sobic002G331450--Sobic007G169600 Sobic001G075101 Sobic001G075101 Sobic002G331450--Sobic001G075101 Sobic002G325600 Sobic002G325600 Sobic002G331450--Sobic002G325600 Sobic003G083000 Sobic003G083000 Sobic002G331450--Sobic003G083000 Sobic002G110200 Sobic002G110200 Sobic002G331450--Sobic002G110200 Sobic006G203000 Sobic006G203000 Sobic002G331450--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G331450--Sobic002G037400 Sobic009G128300 Sobic009G128300 Sobic002G331450--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic002G331450--Sobic002G182800 Sobic007G169600--Sobic001G075101 Sobic007G169600--Sobic003G083000 Sobic007G169600--Sobic002G331450 Sobic007G169600--Sobic002G037400 Sobic007G169600--Sobic006G203000 Sobic005G016900 Sobic005G016900 Sobic007G169600--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic007G169600--Sobic007G143100 Sobic007G169600--Sobic002G325600 Sobic007G143200 Sobic007G143200 Sobic007G169600--Sobic007G143200 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G509400 Sobic001G509400 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic002G325600--Sobic001G075101 Sobic002G325600--Sobic003G083000 Sobic002G325600--Sobic006G203000 Sobic002G325600--Sobic002G037400 Sobic002G325600--Sobic001G509400 Sobic002G325600--Sobic005G016900 Sobic002G325600--Sobic007G143100 Sobic003G083000--Sobic007G169600 Sobic003G083000--Sobic001G075101 Sobic003G083000--Sobic002G331450 Sobic003G083000--Sobic002G037400 Sobic003G083000--Sobic006G203000 Sobic003G083000--Sobic005G016900 Sobic003G083000--Sobic007G143100 Sobic003G083000--Sobic002G325600 Sobic003G083000--Sobic007G143200 Sobic002G110200--Sobic002G331450 Sobic002G110200--Sobic001G075101 Sobic002G110200--Sobic006G203000 Sobic002G110200--Sobic007G169600 Sobic002G110200--Sobic009G128300 Sobic002G110200--Sobic002G182800 Sobic002G013900 Sobic002G013900 Sobic002G110200--Sobic002G013900 Sobic002G110200--Sobic001G509400 Sobic004G170032 Sobic004G170032 Sobic002G110200--Sobic004G170032 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic006G203000--Sobic002G331450 Sobic006G203000--Sobic003G083000 Sobic006G203000--Sobic002G325600 Sobic006G026400 Sobic006G026400 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic002G037400--Sobic007G143100 Sobic002G037400--Sobic005G016900 Sobic009G128300--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic009G128300--Sobic003G233900 Sobic003G227600 Sobic003G227600 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic002G342100 Sobic002G342100 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.