Gene annotation
Transcriptome id Sobic.008G059000.1
Synonym Sb08g004980, ATAAP3, AAP3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amino acid transporter, putative, expressed
UniProt C5YT49
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF290
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os12g08090.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a030927 , Zm00025a054079 , Zm00025a034135 , Zm00025a026558 , Zm00025a054084 , Zm00025a025707 , Zm00025a054081 , Zm00025a054082 , Zm00025a037366
Brachypodium PNT76161 , PNT76162 , KQJ91992 , KQJ91991 , KQK18868 , KQK18866 , KQK18867 , KQJ89071 , KQJ83307 , KQK10853 , KQK10901 , KQK18009 , KQK10902
Barley HORVU5Hr1G037660.9 , HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU7Hr1G038330.8 , HORVU7Hr1G038330.1 , HORVU7Hr1G038330.2 , HORVU7Hr1G038330.3 , HORVU7Hr1G038330.4 , HORVU7Hr1G038330.5 , HORVU7Hr1G038330.6 , HORVU7Hr1G038330.7 , HORVU1Hr1G064970.10 , HORVU1Hr1G064970.12 , HORVU2Hr1G084800.1 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU1Hr1G064970.9 , HORVU1Hr1G064970.8 , HORVU1Hr1G064970.1 , HORVU1Hr1G064970.3 , HORVU1Hr1G064970.5 , HORVU1Hr1G064970.4 , HORVU1Hr1G064970.6
Wheat TraesCS4B02G100800 , TraesCS3B02G420700 , TraesCS1A02G264500 , TraesCS4D02G097400 , TraesCS7A02G188200 , TraesCS5B02G116100 , TraesCS7A02G356600 , TraesCS1D02G264700 , TraesCS7B02G271200 , TraesCS4A02G215300 , TraesCS5A02G115100 , TraesCS5D02G125700 , TraesCS1B02G275200 , TraesCS7D02G366200 , TraesCS2B02G367000 , TraesCS2D02G347000 , TraesCS3A02G388000 , TraesCS7D02G189000 , TraesCS7B02G093200 , TraesCS2A02G348600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
2 Sobic.008G058900 amino acid transporter, putative, expressed -
3 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
4 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
6 Sobic.009G167000 expressed protein -
7 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.009G076500 expressed protein -
9 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
10 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
11 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
12 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.006G026400 - -
16 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
17 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
18 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
19 Sobic.009G030600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -


Gene co-expression network
sample Sobic008G059000 Sobic008G059000 Sobic004G281200 Sobic004G281200 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic002G021300 Sobic002G021300 Sobic008G059000--Sobic002G021300 Sobic003G087100 Sobic003G087100 Sobic008G059000--Sobic003G087100 Sobic006G194600 Sobic006G194600 Sobic008G059000--Sobic006G194600 Sobic009G167000 Sobic009G167000 Sobic008G059000--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic008G059000--Sobic004G244100 Sobic009G076500 Sobic009G076500 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic004G281200--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic006G203000 Sobic006G203000 Sobic004G281200--Sobic006G203000 Sobic002G217100 Sobic002G217100 Sobic004G281200--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic004G281200--Sobic006G210300 Sobic001G081600 Sobic001G081600 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic008G058900--Sobic008G059000 Sobic008G058900--Sobic009G167000 Sobic010G201200 Sobic010G201200 Sobic008G058900--Sobic010G201200 Sobic008G058900--Sobic009G076500 Sobic009G076700 Sobic009G076700 Sobic008G058900--Sobic009G076700 Sobic008G058900--Sobic004G244100 Sobic008G058900--Sobic002G021300 Sobic009G068900 Sobic009G068900 Sobic008G058900--Sobic009G068900 Sobic007G073750 Sobic007G073750 Sobic008G058900--Sobic007G073750 Sobic002G021300--Sobic009G167000 Sobic004G300300 Sobic004G300300 Sobic002G021300--Sobic004G300300 Sobic002G021300--Sobic004G281200 Sobic002G021300--Sobic009G076500 Sobic002G021300--Sobic008G059000 Sobic002G037400 Sobic002G037400 Sobic002G021300--Sobic002G037400 Sobic006G026400 Sobic006G026400 Sobic002G021300--Sobic006G026400 Sobic002G021300--Sobic006G194600 Sobic002G021300--Sobic004G244100 Sobic003G087100--Sobic004G281200 Sobic003G087100--Sobic002G037400 Sobic003G087100--Sobic006G203000 Sobic003G087100--Sobic008G059000 Sobic002G110200 Sobic002G110200 Sobic003G087100--Sobic002G110200 Sobic004G309600 Sobic004G309600 Sobic003G087100--Sobic004G309600 Sobic003G424500 Sobic003G424500 Sobic003G087100--Sobic003G424500 Sobic003G087100--Sobic001G081600 Sobic001G075101 Sobic001G075101 Sobic003G087100--Sobic001G075101 Sobic006G194600--Sobic004G244300 Sobic006G194600--Sobic006G026400 Sobic006G194600--Sobic004G244100 Sobic006G194600--Sobic010G016500 Sobic006G194600--Sobic004G281200 Sobic006G194600--Sobic006G203000 Sobic006G194600--Sobic009G167000 Sobic006G194600--Sobic002G037400 Sobic006G194600--Sobic008G059000 Sobic009G167000--Sobic002G021300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G167000--Sobic009G076500 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic003G268900 Sobic003G268900 Sobic004G244100--Sobic003G268900 Sobic004G244100--Sobic006G194600 Sobic004G244100--Sobic004G244300 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic004G244100--Sobic010G016500 Sobic004G244100--Sobic002G217100 Sobic004G244100--Sobic006G203000 Sobic004G244100--Sobic006G026400 Sobic009G076500--Sobic002G021300 Sobic009G076500--Sobic009G076700 Sobic009G076500--Sobic002G037400 Sobic009G076500--Sobic006G026400 Sobic009G076500--Sobic006G203000 Sobic009G076500--Sobic009G167000 Sobic009G076500--Sobic004G244100 Sobic009G076500--Sobic008G059000 Sobic009G076500--Sobic006G194600 Sobic010G016500--Sobic004G281200 Sobic010G016500--Sobic004G244300 Sobic010G016500--Sobic006G194600 Sobic010G016500--Sobic006G203000 Sobic004G283300 Sobic004G283300 Sobic010G016500--Sobic004G283300 Sobic010G016500--Sobic002G217100 Sobic010G016500--Sobic004G244100 Sobic010G016500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic010G016500--Sobic002G182800
Octagon: transcription factors


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