Gene annotation
Transcriptome id Sobic.003G087100.1,Sobic.003G087100.5,Sobic.003G087100.3,Sobic.003G087100.4
Synonym Sb03g007320, ABA4
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0VWA3 , A0A1W0VWB4 , A0A1B6Q240 , A0A1W0VWC8
Pfam PF14108
Panther DB PTHR34543 PTHR34543:SF1 PTHR34543:SF1 PTHR34543
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67080 : abscisic acid (aba)-deficient 4
RAP-DB (Rice) LOC_Os01g03750.1 : expressed protein
MaizeGDB (Corn) Zm00025a023637 , Zm00025a035543
Brachypodium KQK02517
Barley HORVU5Hr1G036260.1 , HORVU4Hr1G061030.2 , HORVU4Hr1G061030.1
Wheat TraesCS3D02G037000 , TraesCS3B02G039800 , TraesCS3A02G043800 , TraesCS3A02G043800
Populus -


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cDNA sequences
Sobic.003G087100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
2 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
3 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
4 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
7 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
8 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
9 Sobic.001G075101 - -
10 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
11 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
12 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
13 Sobic.006G078300 - -
14 Sobic.002G331450 - -
15 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
16 Sobic.006G026400 - -
17 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
18 Sobic.010G247500 homeobox associated leucine zipper, putative, expressed -
19 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic003G087100 Sobic003G087100 Sobic004G281200 Sobic004G281200 Sobic003G087100--Sobic004G281200 Sobic002G037400 Sobic002G037400 Sobic003G087100--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic003G087100--Sobic006G203000 Sobic008G059000 Sobic008G059000 Sobic003G087100--Sobic008G059000 Sobic002G110200 Sobic002G110200 Sobic003G087100--Sobic002G110200 Sobic004G309600 Sobic004G309600 Sobic003G087100--Sobic004G309600 Sobic003G424500 Sobic003G424500 Sobic003G087100--Sobic003G424500 Sobic001G081600 Sobic001G081600 Sobic003G087100--Sobic001G081600 Sobic001G075101 Sobic001G075101 Sobic003G087100--Sobic001G075101 Sobic010G016500 Sobic010G016500 Sobic004G281200--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic006G194600 Sobic006G194600 Sobic004G281200--Sobic006G194600 Sobic004G281200--Sobic006G203000 Sobic002G217100 Sobic002G217100 Sobic004G281200--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G244100 Sobic004G244100 Sobic004G281200--Sobic004G244100 Sobic002G037400--Sobic006G203000 Sobic007G169600 Sobic007G169600 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic003G083000 Sobic003G083000 Sobic002G037400--Sobic003G083000 Sobic002G331450 Sobic002G331450 Sobic002G037400--Sobic002G331450 Sobic006G026400 Sobic006G026400 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic007G143100 Sobic007G143100 Sobic002G037400--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic002G037400--Sobic005G016900 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic006G203000--Sobic002G331450 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic002G021300 Sobic002G021300 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic008G059000--Sobic006G194600 Sobic009G167000 Sobic009G167000 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic009G076500 Sobic009G076500 Sobic008G059000--Sobic009G076500 Sobic008G059000--Sobic010G016500 Sobic002G110200--Sobic002G331450 Sobic002G110200--Sobic001G075101 Sobic002G110200--Sobic006G203000 Sobic002G110200--Sobic007G169600 Sobic009G128300 Sobic009G128300 Sobic002G110200--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic002G110200--Sobic002G182800 Sobic002G013900 Sobic002G013900 Sobic002G110200--Sobic002G013900 Sobic001G509400 Sobic001G509400 Sobic002G110200--Sobic001G509400 Sobic004G170032 Sobic004G170032 Sobic002G110200--Sobic004G170032 Sobic004G309600--Sobic003G087100 Sobic004G309600--Sobic002G110200 Sobic003G272400 Sobic003G272400 Sobic004G309600--Sobic003G272400 Sobic004G300300 Sobic004G300300 Sobic004G309600--Sobic004G300300 Sobic004G309600--Sobic008G059000 Sobic004G309600--Sobic006G203000 Sobic006G163900 Sobic006G163900 Sobic004G309600--Sobic006G163900 Sobic003G422200 Sobic003G422200 Sobic004G309600--Sobic003G422200 Sobic004G309600--Sobic002G037400 Sobic003G146000 Sobic003G146000 Sobic003G424500--Sobic003G146000 Sobic003G424500--Sobic004G300300 Sobic010G247500 Sobic010G247500 Sobic003G424500--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic003G424500--Sobic009G030600 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic003G424500--Sobic009G076500 Sobic001G462800 Sobic001G462800 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800
Octagon: transcription factors


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