Gene annotation
Transcriptome id Sobic.004G309600.1
Synonym ABF2, SbABI5;bZIP23 transcription factor, SbABA-INSENSITIVE 5, AREB1, ATAREB1, bZIP23, Sb04g034190
Functional annotation ABA signaling component (PubMedID : 24151305)
"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice" (PubMedID : 30367619)
bZIP transcription factor, putative, expressed
UniProt K4GNP0 , V5NZJ3 , A0A096ZUD8 , C5XSV4 , V5NZR5 , K4GQT7
Pfam PF00170
Panther DB PTHR22952 PTHR22952:SF103
NCBI CDD -
KEGG Orthology K14432; ABA responsive element binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G45249 : abscisic acid responsive elements-binding factor 2
RAP-DB (Rice) LOC_Os02g52780.1 : bZIP transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a022224 , Zm00025a049583 , Zm00025a030641 , Zm00025a005419
Brachypodium KQK01749 , KQK01748 , KQJ98641 , KQJ98642 , KQK01750
Barley HORVU6Hr1G080670.15 , HORVU6Hr1G080670.14 , HORVU6Hr1G080670.13 , HORVU6Hr1G080670.12 , HORVU6Hr1G080670.11 , HORVU6Hr1G080670.10 , HORVU6Hr1G080670.7 , HORVU6Hr1G080670.6 , HORVU6Hr1G080670.5 , HORVU6Hr1G080670.4 , HORVU6Hr1G080670.3 , HORVU6Hr1G080670.2 , HORVU6Hr1G080670.1 , HORVU6Hr1G080670.9 , HORVU6Hr1G080670.8
Wheat TraesCS7D02G171300 , TraesCS7B02G075600 , TraesCS2A02G534200 , TraesCS6B02G364000 , TraesCS6D02G312800 , TraesCS4D02G335000 , TraesCS4B02G338700 , TraesCS6A02G333600 , TraesCS6A02G333600 , TraesCS7A02G170600 , TraesCS2D02G536700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.003G272400 DUF292 domain containing protein, expressed -
4 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
5 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
6 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.006G163900 homeobox associated leucine zipper, putative, expressed -
8 Sobic.003G422200 recA protein, expressed -
9 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
10 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
11 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
13 Sobic.003G198150 - -
14 Sobic.002G331450 - -
15 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
16 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
17 Sobic.003G252400 drought induced 19 protein, putative, expressed -
18 Sobic.008G058900 amino acid transporter, putative, expressed -
19 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
20 Sobic.004G170032 - -


Gene co-expression network
sample Sobic004G309600 Sobic004G309600 Sobic003G087100 Sobic003G087100 Sobic004G309600--Sobic003G087100 Sobic002G110200 Sobic002G110200 Sobic004G309600--Sobic002G110200 Sobic003G272400 Sobic003G272400 Sobic004G309600--Sobic003G272400 Sobic004G300300 Sobic004G300300 Sobic004G309600--Sobic004G300300 Sobic008G059000 Sobic008G059000 Sobic004G309600--Sobic008G059000 Sobic006G203000 Sobic006G203000 Sobic004G309600--Sobic006G203000 Sobic006G163900 Sobic006G163900 Sobic004G309600--Sobic006G163900 Sobic003G422200 Sobic003G422200 Sobic004G309600--Sobic003G422200 Sobic002G037400 Sobic002G037400 Sobic004G309600--Sobic002G037400 Sobic004G281200 Sobic004G281200 Sobic003G087100--Sobic004G281200 Sobic003G087100--Sobic002G037400 Sobic003G087100--Sobic006G203000 Sobic003G087100--Sobic008G059000 Sobic003G087100--Sobic002G110200 Sobic003G087100--Sobic004G309600 Sobic003G424500 Sobic003G424500 Sobic003G087100--Sobic003G424500 Sobic001G081600 Sobic001G081600 Sobic003G087100--Sobic001G081600 Sobic001G075101 Sobic001G075101 Sobic003G087100--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic002G110200--Sobic002G331450 Sobic002G110200--Sobic001G075101 Sobic002G110200--Sobic006G203000 Sobic007G169600 Sobic007G169600 Sobic002G110200--Sobic007G169600 Sobic009G128300 Sobic009G128300 Sobic002G110200--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic002G110200--Sobic002G182800 Sobic002G013900 Sobic002G013900 Sobic002G110200--Sobic002G013900 Sobic001G509400 Sobic001G509400 Sobic002G110200--Sobic001G509400 Sobic004G170032 Sobic004G170032 Sobic002G110200--Sobic004G170032 Sobic004G353600 Sobic004G353600 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic002G306000 Sobic002G306000 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G126300 Sobic003G126300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic003G272400--Sobic004G309600 Sobic002G021300 Sobic002G021300 Sobic004G300300--Sobic002G021300 Sobic004G300300--Sobic003G424500 Sobic009G167000 Sobic009G167000 Sobic004G300300--Sobic009G167000 Sobic002G135800 Sobic002G135800 Sobic004G300300--Sobic002G135800 Sobic002G188700 Sobic002G188700 Sobic004G300300--Sobic002G188700 Sobic007G101800 Sobic007G101800 Sobic004G300300--Sobic007G101800 Sobic004G300300--Sobic003G087100 Sobic004G300300--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic004G300300--Sobic009G076500 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic006G194600 Sobic006G194600 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G026400 Sobic006G026400 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic006G163900--Sobic004G309600 Sobic006G163900--Sobic004G300300 Sobic001G436000 Sobic001G436000 Sobic006G163900--Sobic001G436000 Sobic006G163900--Sobic008G059000 Sobic006G163900--Sobic008G058900 Sobic006G163900--Sobic001G110900 Sobic006G163900--Sobic003G424500 Sobic006G163900--Sobic003G087100 Sobic006G163900--Sobic006G203000 Sobic003G422200--Sobic003G424500 Sobic003G422200--Sobic003G087100 Sobic009G030600 Sobic009G030600 Sobic003G422200--Sobic009G030600 Sobic003G422200--Sobic004G309600 Sobic003G422200--Sobic004G300300 Sobic004G176900 Sobic004G176900 Sobic003G422200--Sobic004G176900 Sobic003G422200--Sobic006G203000 Sobic003G422200--Sobic009G076500 Sobic003G422200--Sobic008G059000 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic007G143100 Sobic007G143100 Sobic002G037400--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic002G037400--Sobic005G016900
Octagon: transcription factors


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