Gene annotation
Transcriptome id Sobic.003G198150.1
Synonym -
Functional annotation -
UniProt C5XNU9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G044750 - -
2 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
3 Sobic.009G128300 CUE domain containing protein, expressed -
4 Sobic.001G509400 - -
5 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
6 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.004G170032 - -
8 Sobic.003G233900 - -
9 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
11 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.002G182800 expressed protein -
13 Sobic.003G040800 WRKY102, expressed -
14 Sobic.002G079801 - -
15 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.003G066900 expressed protein -
18 Sobic.002G331450 - -
19 Sobic.001G075101 - -
20 Sobic.001G140200 Homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G198150 Sobic003G198150 Sobic008G044750 Sobic008G044750 Sobic003G198150--Sobic008G044750 Sobic003G198200 Sobic003G198200 Sobic003G198150--Sobic003G198200 Sobic009G128300 Sobic009G128300 Sobic003G198150--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G227600 Sobic003G227600 Sobic003G198150--Sobic003G227600 Sobic004G170032 Sobic004G170032 Sobic003G198150--Sobic004G170032 Sobic003G233900 Sobic003G233900 Sobic003G198150--Sobic003G233900 Sobic001G450800 Sobic001G450800 Sobic003G198150--Sobic001G450800 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic002G182800 Sobic002G182800 Sobic008G044750--Sobic002G182800 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic008G044750--Sobic003G198150 Sobic003G066900 Sobic003G066900 Sobic008G044750--Sobic003G066900 Sobic001G075101 Sobic001G075101 Sobic008G044750--Sobic001G075101 Sobic003G198200--Sobic003G198150 Sobic003G198200--Sobic004G170032 Sobic003G198200--Sobic001G450800 Sobic002G148700 Sobic002G148700 Sobic003G198200--Sobic002G148700 Sobic003G198200--Sobic003G227600 Sobic004G337900 Sobic004G337900 Sobic003G198200--Sobic004G337900 Sobic008G029300 Sobic008G029300 Sobic003G198200--Sobic008G029300 Sobic004G353600 Sobic004G353600 Sobic003G198200--Sobic004G353600 Sobic002G387200 Sobic002G387200 Sobic003G198200--Sobic002G387200 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic002G342100 Sobic002G342100 Sobic009G128300--Sobic002G342100 Sobic002G331450 Sobic002G331450 Sobic009G128300--Sobic002G331450 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic003G079800--Sobic009G128300 Sobic003G079800--Sobic001G509400 Sobic003G079800--Sobic002G182800 Sobic003G079800--Sobic003G233900 Sobic003G079800--Sobic008G044750 Sobic003G079800--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic003G079800--Sobic003G040800 Sobic003G079800--Sobic002G331450 Sobic003G079800--Sobic001G075101 Sobic003G227600--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic002G110200 Sobic002G110200 Sobic004G170032--Sobic002G110200 Sobic004G170032--Sobic002G182800 Sobic004G170032--Sobic009G128300 Sobic004G170032--Sobic002G331450 Sobic004G170032--Sobic001G075101 Sobic004G170032--Sobic007G169600 Sobic004G170032--Sobic003G198150 Sobic004G170032--Sobic001G509400 Sobic004G170032--Sobic003G227600 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G233900--Sobic003G066900 Sobic004G285100 Sobic004G285100 Sobic003G233900--Sobic004G285100 Sobic003G361300 Sobic003G361300 Sobic001G450800--Sobic003G361300 Sobic001G430700 Sobic001G430700 Sobic001G450800--Sobic001G430700 Sobic001G450800--Sobic003G198150 Sobic001G106000 Sobic001G106000 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic001G450800--Sobic003G227600 Sobic001G450800--Sobic008G044750 Sobic001G450800--Sobic009G216900 Sobic001G450800--Sobic004G285100
Octagon: transcription factors


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