Gene annotation
Transcriptome id Sobic.003G066900.1
Synonym Sb03g005690
Functional annotation expressed protein
UniProt A0A1B6Q1N2
Pfam PF05056
Panther DB PTHR33103 PTHR33103:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09140 : Protein of unknown function (DUF674)
RAP-DB (Rice) LOC_Os01g06030.1 : expressed protein
MaizeGDB (Corn) Zm00025a023410 , Zm00025a023414 , Zm00025a023394 , Zm00025a057874 , Zm00025a023389 , Zm00025a023399
Brachypodium KQJ97936 , PNT69791 , PNT69790
Barley HORVU5Hr1G018200.4 , HORVU5Hr1G018200.1 , HORVU5Hr1G018200.2 , HORVU5Hr1G018200.3 , HORVU4Hr1G067800.1 , HORVU6Hr1G065320.1 , HORVU4Hr1G067800.3 , HORVU3Hr1G017690.1 , HORVU3Hr1G015950.5 , HORVU3Hr1G015950.4 , HORVU3Hr1G015950.1 , HORVU3Hr1G015950.3 , HORVU3Hr1G015950.2 , HORVU3Hr1G090770.1 , HORVU3Hr1G017670.5 , HORVU3Hr1G017670.2 , HORVU3Hr1G017670.3 , HORVU3Hr1G017670.1 , HORVU6Hr1G065320.2 , HORVU6Hr1G065320.3 , HORVU3Hr1G090770.2 , HORVU5Hr1G123600.1 , HORVU3Hr1G017670.4 , HORVU5Hr1G010810.1 , HORVU5Hr1G010810.3 , HORVU5Hr1G010810.2
Wheat TraesCS3A02G029000 , TraesCS3D02G089800 , TraesCS3A02G098300 , TraesCS4A02G348300 , TraesCS3A02G089100 , TraesCS3D02G089400 , TraesCS3B02G113900 , TraesCS3D02G098700 , TraesCS3B02G438200 , TraesCS4A02G288100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G233900 - -
2 Sobic.008G044750 - -
3 Sobic.009G128300 CUE domain containing protein, expressed -
4 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
5 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
6 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
7 Sobic.001G509400 - -
8 Sobic.004G155150 - -
9 Sobic.004G257350 - -
10 Sobic.004G211301 - -
11 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
12 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
13 Sobic.002G182800 expressed protein -
14 Sobic.003G040800 WRKY102, expressed -
15 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.009G253950 - -
18 Sobic.006G267900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.003G078501 - -
20 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic003G066900 Sobic003G066900 Sobic003G233900 Sobic003G233900 Sobic003G066900--Sobic003G233900 Sobic008G044750 Sobic008G044750 Sobic003G066900--Sobic008G044750 Sobic009G128300 Sobic009G128300 Sobic003G066900--Sobic009G128300 Sobic009G000700 Sobic009G000700 Sobic003G066900--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic003G066900--Sobic004G310600 Sobic004G285100 Sobic004G285100 Sobic003G066900--Sobic004G285100 Sobic001G509400 Sobic001G509400 Sobic003G066900--Sobic001G509400 Sobic004G155150 Sobic004G155150 Sobic003G066900--Sobic004G155150 Sobic004G257350 Sobic004G257350 Sobic003G066900--Sobic004G257350 Sobic003G233900--Sobic009G128300 Sobic003G227600 Sobic003G227600 Sobic003G233900--Sobic003G227600 Sobic002G182800 Sobic002G182800 Sobic003G233900--Sobic002G182800 Sobic003G040800 Sobic003G040800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic009G216900 Sobic009G216900 Sobic003G233900--Sobic009G216900 Sobic003G233900--Sobic004G257350 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic003G079800 Sobic003G079800 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic003G198150 Sobic003G198150 Sobic008G044750--Sobic003G198150 Sobic008G044750--Sobic003G066900 Sobic001G075101 Sobic001G075101 Sobic008G044750--Sobic001G075101 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic002G342100 Sobic002G342100 Sobic009G128300--Sobic002G342100 Sobic002G331450 Sobic002G331450 Sobic009G128300--Sobic002G331450 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic009G000700--Sobic004G310600 Sobic003G078501 Sobic003G078501 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic010G006700 Sobic010G006700 Sobic009G000700--Sobic010G006700 Sobic004G331300 Sobic004G331300 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic001G106000 Sobic001G106000 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G285100--Sobic004G155150 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100 Sobic004G257350--Sobic003G233900 Sobic004G257350--Sobic004G310600 Sobic004G257350--Sobic009G000700 Sobic004G257350--Sobic004G155150 Sobic004G257350--Sobic003G040800 Sobic004G257350--Sobic003G227600 Sobic004G257350--Sobic009G128300 Sobic004G257350--Sobic003G066900 Sobic004G257350--Sobic003G078501
Octagon: transcription factors


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