Gene annotation
Transcriptome id Sobic.003G079800.1
Synonym
Functional annotation Ser/Thr protein kinase, putative, expressed
UniProt A0A1W0VW62 , A0A109ND21
Pfam PF00069
Panther DB PTHR27009 PTHR27009:SF10
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G39020 : Malectin/receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os01g04570.2 : Ser/Thr protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a023540 , Zm00025a023539
Brachypodium PNT69893
Barley HORVU3Hr1G007680.7 , HORVU3Hr1G007680.4 , HORVU3Hr1G007680.5 , HORVU3Hr1G007680.8 , HORVU3Hr1G007680.9 , HORVU3Hr1G007680.43 , HORVU3Hr1G007680.41 , HORVU3Hr1G007680.40 , HORVU0Hr1G006150.2 , HORVU0Hr1G006150.3 , HORVU3Hr1G007720.1 , HORVU3Hr1G007720.3 , HORVU3Hr1G007720.2 , HORVU3Hr1G007720.5 , HORVU3Hr1G007720.4 , HORVU0Hr1G006160.4 , HORVU0Hr1G006160.3 , HORVU0Hr1G006160.2 , HORVU0Hr1G006160.1 , HORVU0Hr1G006140.9 , HORVU0Hr1G006140.7 , HORVU0Hr1G006140.1 , HORVU0Hr1G006140.3 , HORVU0Hr1G006140.2 , HORVU3Hr1G007680.19 , HORVU3Hr1G007680.14 , HORVU3Hr1G007680.16 , HORVU3Hr1G007680.10 , HORVU3Hr1G007680.12 , HORVU3Hr1G007680.13 , HORVU0Hr1G006140.5 , HORVU0Hr1G006140.4 , HORVU0Hr1G006140.6 , HORVU3Hr1G007680.21 , HORVU3Hr1G007680.20 , HORVU3Hr1G007680.23 , HORVU3Hr1G007680.22 , HORVU3Hr1G007680.25 , HORVU3Hr1G007680.24 , HORVU3Hr1G007680.27 , HORVU3Hr1G007680.26 , HORVU3Hr1G007680.36 , HORVU3Hr1G007680.37 , HORVU3Hr1G007680.38
Wheat TraesCS3B02G056100 , TraesCS3B02G056100 , TraesCS3B02G056100 , TraesCS3B02G055700 , TraesCS3B02G057900 , TraesCS3B02G057900 , TraesCS3A02G049500 , TraesCS3B02G059000 , TraesCS4A02G497300 , TraesCS3B02G056000 , TraesCS3B02G058500 , TraesCS7B02G061900 , TraesCS3B02G058100 , TraesCS4A02G499000 , TraesCS4A02G499400 , TraesCS3D02G048700 , TraesCS3B02G057400 , TraesCS3B02G057200 , TraesCS3A02G050211 , TraesCS4A02G497900 , TraesCS3B02G058000 , TraesCS3B02G059017 , TraesCS3B02G055835 , TraesCS3B02G055835 , TraesCS3B02G057947 , TraesCS3B02G057947
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G128300 CUE domain containing protein, expressed -
2 Sobic.001G509400 - -
3 Sobic.002G182800 expressed protein -
4 Sobic.003G233900 - -
5 Sobic.008G044750 - -
6 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.003G040800 WRKY102, expressed -
8 Sobic.002G331450 - -
9 Sobic.001G075101 - -
10 Sobic.003G198150 - -
11 Sobic.002G342100 no apical meristem protein, putative, expressed -
12 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
13 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
16 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
18 Sobic.009G253950 - -
19 Sobic.002G079801 - -
20 Sobic.003G066900 expressed protein -


Gene co-expression network
sample Sobic003G079800 Sobic003G079800 Sobic009G128300 Sobic009G128300 Sobic003G079800--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic003G079800--Sobic001G509400 Sobic002G182800 Sobic002G182800 Sobic003G079800--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic003G079800--Sobic003G233900 Sobic008G044750 Sobic008G044750 Sobic003G079800--Sobic008G044750 Sobic003G227600 Sobic003G227600 Sobic003G079800--Sobic003G227600 Sobic003G040800 Sobic003G040800 Sobic003G079800--Sobic003G040800 Sobic002G331450 Sobic002G331450 Sobic003G079800--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic003G079800--Sobic001G075101 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic002G342100 Sobic002G342100 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic009G216900 Sobic009G216900 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic004G285100 Sobic004G285100 Sobic003G233900--Sobic004G285100 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic003G198150 Sobic003G198150 Sobic008G044750--Sobic003G198150 Sobic008G044750--Sobic003G066900 Sobic008G044750--Sobic001G075101 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic001G106000 Sobic001G106000 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic003G083000 Sobic003G083000 Sobic002G331450--Sobic003G083000 Sobic002G110200 Sobic002G110200 Sobic002G331450--Sobic002G110200 Sobic006G203000 Sobic006G203000 Sobic002G331450--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G331450--Sobic002G037400 Sobic002G331450--Sobic009G128300 Sobic002G331450--Sobic002G182800 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G075101--Sobic001G509400 Sobic001G075101--Sobic002G182800
Octagon: transcription factors


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