Gene annotation
Transcriptome id Sobic.003G040800.1
Synonym Sb03g003640, WRKY13, ATWRKY13
Functional annotation WRKY102, expressed
UniProt A0A1W0VVM2
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G39410 : WRKY DNA-binding protein 13
RAP-DB (Rice) LOC_Os01g08710.1 : WRKY102, expressed
MaizeGDB (Corn) Zm00025a056660 , Zm00025a023152
Brachypodium KQK03050 , KQK05181 , KQK00570 , KQJ83893
Barley HORVU1Hr1G080300.1 , HORVU1Hr1G080300.2 , HORVU1Hr1G080300.3 , HORVU1Hr1G080300.4 , HORVU1Hr1G080300.5 , HORVU3Hr1G021120.3 , HORVU3Hr1G021120.1 , HORVU3Hr1G021120.6 , HORVU3Hr1G021120.2 , HORVU3Hr1G021120.5 , HORVU0Hr1G001430.1 , HORVU3Hr1G021120.4
Wheat TraesCS2B02G410400 , TraesCS3B02G135300 , TraesCS2A02G392100 , TraesCS1B02G374900 , TraesCS3D02G118100 , TraesCS3A02G116200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
2 Sobic.003G233900 - -
3 Sobic.002G182800 expressed protein -
4 Sobic.009G128300 CUE domain containing protein, expressed -
5 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
6 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
8 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.001G509400 - -
10 Sobic.002G342100 no apical meristem protein, putative, expressed -
11 Sobic.009G253950 - -
12 Sobic.001G075101 - -
13 Sobic.007G153001 - -
14 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
15 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
16 Sobic.002G331450 - -
17 Sobic.002G023900 Homeobox domain containing protein, expressed -
18 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
19 Sobic.008G044750 - -
20 Sobic.004G257350 - -


Gene co-expression network
sample Sobic003G040800 Sobic003G040800 Sobic001G106000 Sobic001G106000 Sobic003G040800--Sobic001G106000 Sobic003G233900 Sobic003G233900 Sobic003G040800--Sobic003G233900 Sobic002G182800 Sobic002G182800 Sobic003G040800--Sobic002G182800 Sobic009G128300 Sobic009G128300 Sobic003G040800--Sobic009G128300 Sobic003G227600 Sobic003G227600 Sobic003G040800--Sobic003G227600 Sobic009G216900 Sobic009G216900 Sobic003G040800--Sobic009G216900 Sobic004G285100 Sobic004G285100 Sobic003G040800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic003G040800--Sobic003G017200 Sobic001G509400 Sobic001G509400 Sobic003G040800--Sobic001G509400 Sobic001G106000--Sobic003G040800 Sobic001G106000--Sobic003G017200 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G430700 Sobic001G430700 Sobic001G106000--Sobic001G430700 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic001G075101 Sobic001G075101 Sobic002G182800--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G342100 Sobic002G342100 Sobic002G182800--Sobic002G342100 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic009G216900--Sobic004G285100 Sobic009G216900--Sobic003G079800 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G310600 Sobic004G310600 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G155150 Sobic004G155150 Sobic004G285100--Sobic004G155150 Sobic003G017200--Sobic001G106000 Sobic003G017200--Sobic003G040800 Sobic003G017200--Sobic002G342100 Sobic003G017200--Sobic007G153001 Sobic006G200200 Sobic006G200200 Sobic003G017200--Sobic006G200200 Sobic003G017200--Sobic009G128300 Sobic003G144200 Sobic003G144200 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic003G017200--Sobic002G182800 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600
Octagon: transcription factors


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