Gene annotation
Transcriptome id Sobic.003G017200.1
Synonym FT
Functional annotation osFTL1 FT-Like1 homologous to Flowering Locus T gene
contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
UniProt A0A1B6Q0U9
Pfam PF01161
Panther DB PTHR11362 PTHR11362:SF21
NCBI CDD KOG3346; Phosphatidylethanolamine binding protein
KEGG Orthology K16223; protein FLOWERING LOCUS T
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65480 : PEBP (phosphatidylethanolamine-binding protein) family protein
RAP-DB (Rice) LOC_Os01g11940.1 : osFTL1 FT-Like1 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
MaizeGDB (Corn) Zm00025a035925
Brachypodium KQK03315
Barley HORVU3Hr1G027590.13 , HORVU3Hr1G027590.8 , HORVU3Hr1G027590.9 , HORVU3Hr1G027590.1 , HORVU3Hr1G027590.2 , HORVU3Hr1G027590.3 , HORVU3Hr1G027590.4 , HORVU3Hr1G027590.5 , HORVU3Hr1G027590.6 , HORVU3Hr1G027590.7 , HORVU3Hr1G027590.12 , HORVU3Hr1G027590.10 , HORVU3Hr1G027590.11 , HORVU3Hr1G027590.16 , HORVU3Hr1G027590.14 , HORVU3Hr1G027590.15
Wheat TraesCS3B02G162000 , TraesCS3B02G162000 , TraesCS3A02G143100 , TraesCS7A02G115400 , TraesCS3D02G144500
Populus -


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cDNA sequences
Sobic.003G017200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
2 Sobic.003G040800 WRKY102, expressed -
3 Sobic.002G342100 no apical meristem protein, putative, expressed -
4 Sobic.007G153001 - -
5 Sobic.006G200200 expressed protein -
6 Sobic.009G128300 CUE domain containing protein, expressed -
7 Sobic.003G144200 Homeobox domain containing protein, expressed -
8 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
9 Sobic.002G182800 expressed protein -
10 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
11 Sobic.001G075101 - -
12 Sobic.001G469600 "similar to Mannitol transporter, up-regulated under drought stress, mapped onto a stay green QTL (QSTG meta4.1)"(PubMedID : 24655390)@similar to Mannitol transporter(PubMedID : 24655390)@transporter family protein, putative, expressed -
13 Sobic.002G023900 Homeobox domain containing protein, expressed -
14 Sobic.003G233900 - -
15 Sobic.002G331450 - -
16 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
17 Sobic.001G509400 - -
18 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
20 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -


Gene co-expression network
sample Sobic003G017200 Sobic003G017200 Sobic001G106000 Sobic001G106000 Sobic003G017200--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic003G017200--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G017200--Sobic002G342100 Sobic007G153001 Sobic007G153001 Sobic003G017200--Sobic007G153001 Sobic006G200200 Sobic006G200200 Sobic003G017200--Sobic006G200200 Sobic009G128300 Sobic009G128300 Sobic003G017200--Sobic009G128300 Sobic003G144200 Sobic003G144200 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic002G182800 Sobic002G182800 Sobic003G017200--Sobic002G182800 Sobic001G106000--Sobic003G040800 Sobic001G106000--Sobic003G017200 Sobic003G233900 Sobic003G233900 Sobic001G106000--Sobic003G233900 Sobic004G285100 Sobic004G285100 Sobic001G106000--Sobic004G285100 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G430700 Sobic001G430700 Sobic001G106000--Sobic001G430700 Sobic003G227600 Sobic003G227600 Sobic001G106000--Sobic003G227600 Sobic001G106000--Sobic007G153001 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic009G216900 Sobic009G216900 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G040800--Sobic003G017200 Sobic001G509400 Sobic001G509400 Sobic003G040800--Sobic001G509400 Sobic002G342100--Sobic009G128300 Sobic001G075101 Sobic001G075101 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G331450 Sobic002G331450 Sobic002G342100--Sobic002G331450 Sobic007G169600 Sobic007G169600 Sobic002G342100--Sobic007G169600 Sobic002G342100--Sobic003G083000 Sobic002G342100--Sobic007G153001 Sobic002G037400 Sobic002G037400 Sobic002G342100--Sobic002G037400 Sobic007G153001--Sobic001G075101 Sobic007G153001--Sobic007G169600 Sobic007G153001--Sobic003G083000 Sobic007G153001--Sobic002G023900 Sobic007G153001--Sobic002G342100 Sobic007G153001--Sobic002G331450 Sobic007G153001--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic007G153001--Sobic006G203000 Sobic002G325600 Sobic002G325600 Sobic007G153001--Sobic002G325600 Sobic006G200200--Sobic003G017200 Sobic006G200200--Sobic003G083000 Sobic006G200200--Sobic007G169600 Sobic006G200200--Sobic001G075101 Sobic006G200200--Sobic002G331450 Sobic006G200200--Sobic002G037400 Sobic006G200200--Sobic002G182800 Sobic006G200200--Sobic006G203000 Sobic006G200200--Sobic002G325600 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic003G144200--Sobic003G017200 Sobic003G144200--Sobic002G023900 Sobic001G157400 Sobic001G157400 Sobic003G144200--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic003G144200--Sobic009G159900 Sobic001G050800 Sobic001G050800 Sobic003G144200--Sobic001G050800 Sobic001G316900 Sobic001G316900 Sobic003G144200--Sobic001G316900 Sobic003G144200--Sobic001G106000 Sobic009G170100 Sobic009G170100 Sobic003G144200--Sobic009G170100 Sobic003G144200--Sobic007G153001 Sobic003G083000--Sobic007G169600 Sobic003G083000--Sobic001G075101 Sobic003G083000--Sobic002G331450 Sobic003G083000--Sobic002G037400 Sobic003G083000--Sobic006G203000 Sobic005G016900 Sobic005G016900 Sobic003G083000--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic003G083000--Sobic007G143100 Sobic003G083000--Sobic002G325600 Sobic007G143200 Sobic007G143200 Sobic003G083000--Sobic007G143200 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100
Octagon: transcription factors


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