Gene annotation
Transcriptome id Sobic.009G216900.1
Synonym ATMYB86, MYB86, Sb09g027200
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
myb-like DNA-binding domain containing protein, putative, expressed
UniProt C5YUX1
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF597
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26660 : myb domain protein 86
RAP-DB (Rice) LOC_Os05g46610.1 : myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048106 , Zm00025a055223 , Zm00025a054415 , Zm00025a014457 , Zm00025a009985 , Zm00025a044427 , Zm00025a038916 , Zm00025a027885 , Zm00025a033716 , Zm00025a034217 , Zm00025a048371 , Zm00025a036493 , Zm00025a004957 , Zm00025a041887 , Zm00025a014898 , Zm00025a039543 , Zm00025a018024 , Zm00025a049338 , Zm00025a005685 , Zm00025a025715 , Zm00025a011116 , Zm00025a027136 , Zm00025a028816 , Zm00025a023288 , Zm00025a056901
Brachypodium KQJ91191 , KQJ86560 , KQK05100 , PNT65032 , KQJ83102 , KQJ92025 , KQJ98746 , KQJ89177 , KQK18925 , KQK18924 , KQJ87229 , KQK00405 , KQK10836 , KQK09372 , KQK15782 , KQK01840 , KQK08236 , KQK00512 , KQJ91235
Barley HORVU1Hr1G078950.2 , HORVU1Hr1G078950.1 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU6Hr1G058630.2 , HORVU6Hr1G058630.3 , HORVU6Hr1G078300.1 , HORVU6Hr1G078300.2 , HORVU6Hr1G078300.3 , HORVU7Hr1G037060.3 , HORVU7Hr1G037060.4 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU1Hr1G078940.2 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU6Hr1G058640.1 , HORVU6Hr1G058630.1 , HORVU1Hr1G078940.1
Wheat TraesCS1D02G371900 , TraesCS1A02G365900 , TraesCS2B02G252000 , TraesCS7B02G357900 , TraesCS2D02G445900 , TraesCS6B02G349200 , TraesCS3D02G255400 , TraesCS7A02G458700 , TraesCS2D02G446000 , TraesCS2D02G446500 , TraesCS5B02G330100 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS2B02G467700 , TraesCS1D02G371800 , TraesCS1D02G371700 , TraesCS1A02G268800 , TraesCS3D02G329400 , TraesCS3D02G329400 , TraesCS3D02G329400 , TraesCS6D02G298100 , TraesCS6D02G298100 , TraesCS1D02G371500 , TraesCS1D02G371600 , TraesCS2D02G446400 , TraesCS1A02G366000 , TraesCS5D02G335700 , TraesCS5B02G320800 , TraesCS2A02G447600 , TraesCS3B02G286500 , TraesCS1A02G366200 , TraesCS5B02G105900 , TraesCS7D02G181400 , TraesCS5A02G329900 , TraesCS1D02G371400 , TraesCS2D02G234000 , TraesCS2A02G447300 , TraesCS6B02G349100 , TraesCS3A02G384400 , TraesCS1B02G383700 , TraesCS2D02G446300 , TraesCS5A02G320500 , TraesCS5D02G326600 , TraesCS2A02G447400 , TraesCS1A02G366100 , TraesCS1B02G383800 , TraesCS7D02G446700 , TraesCS5D02G113300 , TraesCS5A02G101000 , TraesCS7B02G085100 , TraesCS1B02G383900 , TraesCS6A02G318900 , TraesCS7A02G179900 , TraesCS2A02G230400 , TraesCS1B02G383600 , TraesCS3B02G416400 , TraesCS2A02G447200 , TraesCS2A02G445500 , TraesCS1A02G366300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
2 Sobic.003G233900 - -
3 Sobic.009G128300 CUE domain containing protein, expressed -
4 Sobic.003G040800 WRKY102, expressed -
5 Sobic.002G182800 expressed protein -
6 Sobic.002G342100 no apical meristem protein, putative, expressed -
7 Sobic.001G509400 - -
8 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
9 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
10 Sobic.009G253950 - -
11 Sobic.008G044750 - -
12 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
13 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
14 Sobic.001G075101 - -
15 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
16 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
18 Sobic.003G198150 - -
19 Sobic.004G170032 - -
20 Sobic.004G257350 - -


Gene co-expression network
sample Sobic009G216900 Sobic009G216900 Sobic003G227600 Sobic003G227600 Sobic009G216900--Sobic003G227600 Sobic003G233900 Sobic003G233900 Sobic009G216900--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic009G216900--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic009G216900--Sobic003G040800 Sobic002G182800 Sobic002G182800 Sobic009G216900--Sobic002G182800 Sobic002G342100 Sobic002G342100 Sobic009G216900--Sobic002G342100 Sobic001G509400 Sobic001G509400 Sobic009G216900--Sobic001G509400 Sobic004G285100 Sobic004G285100 Sobic009G216900--Sobic004G285100 Sobic003G079800 Sobic003G079800 Sobic009G216900--Sobic003G079800 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic001G075101 Sobic001G075101 Sobic003G227600--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G227600--Sobic002G331450 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic001G106000 Sobic001G106000 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic002G182800--Sobic009G128300 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100 Sobic002G342100--Sobic009G128300 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic007G169600 Sobic007G169600 Sobic002G342100--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic002G342100--Sobic003G083000 Sobic007G153001 Sobic007G153001 Sobic002G342100--Sobic007G153001 Sobic002G037400 Sobic002G037400 Sobic002G342100--Sobic002G037400 Sobic001G509400--Sobic008G044750 Sobic001G509400--Sobic009G128300 Sobic001G509400--Sobic002G182800 Sobic001G509400--Sobic001G075101 Sobic001G509400--Sobic002G331450 Sobic002G325600 Sobic002G325600 Sobic001G509400--Sobic002G325600 Sobic001G509400--Sobic003G079800 Sobic001G509400--Sobic007G169600 Sobic001G509400--Sobic003G227600 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G310600 Sobic004G310600 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G155150 Sobic004G155150 Sobic004G285100--Sobic004G155150 Sobic003G079800--Sobic009G128300 Sobic003G079800--Sobic001G509400 Sobic003G079800--Sobic002G182800 Sobic003G079800--Sobic003G233900 Sobic003G079800--Sobic008G044750 Sobic003G079800--Sobic003G227600 Sobic003G079800--Sobic003G040800 Sobic003G079800--Sobic002G331450 Sobic003G079800--Sobic001G075101
Octagon: transcription factors


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