Gene annotation
Transcriptome id Sobic.001G469600.1
Synonym PMT5, Sb01g044010, ATPLT5, ATPMT5
Functional annotation "similar to Mannitol transporter, up-regulated under drought stress, mapped onto a stay green QTL (QSTG meta4.1)" (PubMedID : 24655390)
similar to Mannitol transporter (PubMedID : 24655390)
transporter family protein, putative, expressed
UniProt C5WUN8
Pfam PF00083
Panther DB PTHR23500 PTHR23500:SF38
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G18830 : polyol/monosaccharide transporter 5
RAP-DB (Rice) LOC_Os03g10090.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053173 , Zm00025a001208 , Zm00025a001212 , Zm00025a009278
Brachypodium KQK15520 , KQK23114 , KQJ85315 , KQJ85317 , KQJ85316 , KQJ85318
Barley HORVU4Hr1G071000.2 , HORVU4Hr1G071000.1 , HORVU2Hr1G036570.1 , HORVU2Hr1G036570.3 , HORVU2Hr1G036570.2 , HORVU2Hr1G036570.5 , HORVU2Hr1G036570.4 , HORVU2Hr1G036570.6 , HORVU2Hr1G036590.4 , HORVU2Hr1G036590.3 , HORVU2Hr1G036590.2 , HORVU2Hr1G036590.1
Wheat TraesCS1A02G426300 , TraesCS4B02G262800 , TraesCS4D02G262900 , TraesCS2A02G188600 , TraesCS2B02G218700 , TraesCS4A02G042100 , TraesCS4A02G042000 , TraesCS1B02G460600 , TraesCS1B02G460600 , TraesCS2D02G199100 , TraesCS1D02G435800 , TraesCS4D02G263000 , TraesCS4B02G262900
Populus -


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cDNA sequences
Sobic.001G469600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
2 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
3 Sobic.006G200200 expressed protein -
4 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.002G342100 no apical meristem protein, putative, expressed -
6 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.003G040800 WRKY102, expressed -
8 Sobic.007G153001 - -
9 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
10 Sobic.001G075101 - -
11 Sobic.003G144200 Homeobox domain containing protein, expressed -
12 Sobic.002G182800 expressed protein -
13 Sobic.009G128300 CUE domain containing protein, expressed -
14 Sobic.003G233900 - -
15 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
16 Sobic.003G198150 - -
17 Sobic.004G170032 - -
18 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
19 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
20 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic001G469600 Sobic001G469600 Sobic003G017200 Sobic003G017200 Sobic001G469600--Sobic003G017200 Sobic003G227600 Sobic003G227600 Sobic001G469600--Sobic003G227600 Sobic006G200200 Sobic006G200200 Sobic001G469600--Sobic006G200200 Sobic006G069200 Sobic006G069200 Sobic001G469600--Sobic006G069200 Sobic002G342100 Sobic002G342100 Sobic001G469600--Sobic002G342100 Sobic009G216900 Sobic009G216900 Sobic001G469600--Sobic009G216900 Sobic003G040800 Sobic003G040800 Sobic001G469600--Sobic003G040800 Sobic007G153001 Sobic007G153001 Sobic001G469600--Sobic007G153001 Sobic006G032200 Sobic006G032200 Sobic001G469600--Sobic006G032200 Sobic001G106000 Sobic001G106000 Sobic003G017200--Sobic001G106000 Sobic003G017200--Sobic003G040800 Sobic003G017200--Sobic002G342100 Sobic003G017200--Sobic007G153001 Sobic003G017200--Sobic006G200200 Sobic009G128300 Sobic009G128300 Sobic003G017200--Sobic009G128300 Sobic003G144200 Sobic003G144200 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic002G182800 Sobic002G182800 Sobic003G017200--Sobic002G182800 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic001G509400 Sobic001G509400 Sobic003G227600--Sobic001G509400 Sobic001G075101 Sobic001G075101 Sobic003G227600--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G227600--Sobic002G331450 Sobic006G200200--Sobic003G017200 Sobic006G200200--Sobic003G083000 Sobic007G169600 Sobic007G169600 Sobic006G200200--Sobic007G169600 Sobic006G200200--Sobic001G075101 Sobic006G200200--Sobic002G331450 Sobic002G037400 Sobic002G037400 Sobic006G200200--Sobic002G037400 Sobic006G200200--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic006G200200--Sobic006G203000 Sobic002G325600 Sobic002G325600 Sobic006G200200--Sobic002G325600 Sobic006G069200--Sobic002G342100 Sobic006G069200--Sobic001G075101 Sobic006G069200--Sobic007G153001 Sobic006G069200--Sobic009G128300 Sobic006G069200--Sobic002G182800 Sobic010G016500 Sobic010G016500 Sobic006G069200--Sobic010G016500 Sobic006G069200--Sobic003G227600 Sobic006G069200--Sobic003G233900 Sobic006G069200--Sobic009G216900 Sobic002G342100--Sobic009G128300 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic002G342100--Sobic007G169600 Sobic002G342100--Sobic003G083000 Sobic002G342100--Sobic007G153001 Sobic002G342100--Sobic002G037400 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic004G285100 Sobic004G285100 Sobic009G216900--Sobic004G285100 Sobic003G079800 Sobic003G079800 Sobic009G216900--Sobic003G079800 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic007G153001--Sobic001G075101 Sobic007G153001--Sobic007G169600 Sobic007G153001--Sobic003G083000 Sobic002G023900 Sobic002G023900 Sobic007G153001--Sobic002G023900 Sobic007G153001--Sobic002G342100 Sobic007G153001--Sobic002G331450 Sobic007G153001--Sobic002G037400 Sobic007G153001--Sobic006G203000 Sobic007G153001--Sobic002G325600 Sobic009G170100 Sobic009G170100 Sobic006G032200--Sobic009G170100 Sobic004G283300 Sobic004G283300 Sobic006G032200--Sobic004G283300 Sobic006G032200--Sobic002G037400 Sobic006G032200--Sobic006G203000 Sobic004G281200 Sobic004G281200 Sobic006G032200--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic006G032200--Sobic002G344700 Sobic006G032200--Sobic009G128300 Sobic006G032200--Sobic001G075101 Sobic006G032200--Sobic010G016500
Octagon: transcription factors


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