Gene annotation
Transcriptome id Sobic.003G078501.2,Sobic.003G078501.1
Synonym -
Functional annotation -
UniProt A0A1W0VW41 , A0A1W0VW43
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
2 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
3 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
4 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
5 Sobic.001G159850 - -
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.004G331300 AP2 domain containing protein, expressed -
20 Sobic.003G367350 - -


Gene co-expression network
sample Sobic003G078501 Sobic003G078501 Sobic004G310600 Sobic004G310600 Sobic003G078501--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic003G078501--Sobic009G000700 Sobic010G006700 Sobic010G006700 Sobic003G078501--Sobic010G006700 Sobic001G125100 Sobic001G125100 Sobic003G078501--Sobic001G125100 Sobic001G159850 Sobic001G159850 Sobic003G078501--Sobic001G159850 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic003G373150 Sobic003G373150 Sobic004G310600--Sobic003G373150 Sobic004G155150 Sobic004G155150 Sobic004G310600--Sobic004G155150 Sobic004G331300 Sobic004G331300 Sobic004G310600--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic006G267900 Sobic006G267900 Sobic004G310600--Sobic006G267900 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic009G000700--Sobic003G373150 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic001G125100--Sobic003G078501 Sobic001G125100--Sobic010G006700 Sobic001G125100--Sobic003G373150 Sobic001G125100--Sobic001G159850 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.