Gene annotation
Transcriptome id Sobic.004G331300.3,Sobic.004G331300.2
Synonym Sb04g036020
Functional annotation AP2 domain containing protein, expressed
UniProt C5XUH5
Pfam PF00847
Panther DB PTHR31194 PTHR31194:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G25190 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g55380.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019536 , Zm00025a032925 , Zm00025a051285 , Zm00025a049794 , Zm00025a009475 , Zm00025a021006 , Zm00025a022123 , Zm00025a057246 , Zm00025a032103
Brachypodium KQK00491 , KQK19294 , KQK17764 , KQJ98221 , KQK01160 , KQJ85074
Barley HORVU7Hr1G029870.1 , HORVU7Hr1G029870.3 , HORVU7Hr1G029870.2 , HORVU7Hr1G029870.5 , HORVU7Hr1G029870.4 , HORVU7Hr1G089930.8 , HORVU7Hr1G089930.7 , HORVU7Hr1G089930.4 , HORVU7Hr1G089930.5 , HORVU7Hr1G037180.2 , HORVU7Hr1G037180.1 , HORVU2Hr1G111680.8 , HORVU2Hr1G111680.7 , HORVU2Hr1G111680.6 , HORVU2Hr1G111680.5 , HORVU2Hr1G111680.4 , HORVU2Hr1G111680.3 , HORVU2Hr1G111680.2 , HORVU2Hr1G111680.1 , HORVU6Hr1G085850.4 , HORVU6Hr1G085850.5 , HORVU6Hr1G085850.6 , HORVU6Hr1G085850.2 , HORVU6Hr1G085850.3 , HORVU6Hr1G038120.3 , HORVU6Hr1G038120.7
Wheat TraesCS6B02G210300 , TraesCS6A02G360300 , TraesCS2A02G503100 , TraesCS7D02G147200 , TraesCS7A02G376300 , TraesCS7D02G372700 , TraesCS7A02G145800 , TraesCS7B02G277800 , TraesCS7D02G147100 , TraesCS6D02G343800 , TraesCS2D02G503900 , TraesCS2B02G531100 , TraesCS6A02G181400 , TraesCS6A02G181400 , TraesCS2D02G503100 , TraesCS7B02G048100 , TraesCS2B02G530800 , TraesCS6B02G393200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G159850 - -
2 Sobic.001G159850 - -
3 Sobic.001G159850 - -
4 Sobic.001G159850 - -
5 Sobic.001G159850 - -
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
16 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
17 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
18 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
19 Sobic.003G078501 - -
20 Sobic.007G051600 - -


Gene co-expression network
sample Sobic004G331300 Sobic004G331300 Sobic001G159850 Sobic001G159850 Sobic004G331300--Sobic001G159850 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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