Gene annotation
Transcriptome id Sobic.010G006700.1
Synonym Sb10g000830
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt A0A1W0VR14
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G01440 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os06g01966.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a050293
Brachypodium KQK20015 , KQK20016
Barley HORVU5Hr1G067230.62 , HORVU5Hr1G067230.63 , HORVU5Hr1G067230.60 , HORVU5Hr1G067230.61 , HORVU7Hr1G002600.15 , HORVU7Hr1G002600.14 , HORVU7Hr1G002600.16 , HORVU7Hr1G002600.11 , HORVU7Hr1G002600.10 , HORVU7Hr1G002600.13 , HORVU7Hr1G002600.12 , HORVU7Hr1G002600.19 , HORVU7Hr1G002600.18 , HORVU5Hr1G067230.59 , HORVU5Hr1G067230.58 , HORVU5Hr1G067230.53 , HORVU5Hr1G067230.52 , HORVU5Hr1G067230.51 , HORVU5Hr1G067230.50 , HORVU5Hr1G067230.57 , HORVU5Hr1G067230.56 , HORVU5Hr1G067230.55 , HORVU5Hr1G067230.54 , HORVU5Hr1G067230.28 , HORVU5Hr1G067230.29 , HORVU5Hr1G067230.26 , HORVU5Hr1G067230.27 , HORVU5Hr1G067230.24 , HORVU5Hr1G067230.25 , HORVU5Hr1G067230.22 , HORVU5Hr1G067230.23 , HORVU5Hr1G067230.20 , HORVU5Hr1G067230.21 , HORVU5Hr1G067230.36 , HORVU5Hr1G067230.17 , HORVU5Hr1G067230.16 , HORVU5Hr1G067230.15 , HORVU5Hr1G067230.14 , HORVU5Hr1G067230.13 , HORVU5Hr1G067230.12 , HORVU5Hr1G067230.11 , HORVU5Hr1G067230.10 , HORVU5Hr1G067230.19 , HORVU5Hr1G067230.18 , HORVU5Hr1G067230.7 , HORVU5Hr1G067230.6 , HORVU5Hr1G067230.5 , HORVU5Hr1G067230.4 , HORVU5Hr1G067230.3 , HORVU5Hr1G067230.1 , HORVU7Hr1G002600.1 , HORVU7Hr1G002600.3 , HORVU7Hr1G002600.2 , HORVU7Hr1G002600.5 , HORVU7Hr1G002600.4 , HORVU7Hr1G002600.7 , HORVU7Hr1G002600.6 , HORVU7Hr1G002600.9 , HORVU7Hr1G002600.8 , HORVU5Hr1G067230.48 , HORVU5Hr1G067230.49 , HORVU5Hr1G067230.40 , HORVU5Hr1G067230.41 , HORVU5Hr1G067230.42 , HORVU5Hr1G067230.43 , HORVU5Hr1G067230.44 , HORVU5Hr1G067230.45 , HORVU5Hr1G067230.46 , HORVU5Hr1G067230.47 , HORVU7Hr1G002600.40 , HORVU7Hr1G002600.41 , HORVU7Hr1G002600.33 , HORVU7Hr1G002600.32 , HORVU7Hr1G002600.31 , HORVU7Hr1G002600.30 , HORVU7Hr1G002600.37 , HORVU7Hr1G002600.36 , HORVU7Hr1G002600.35 , HORVU7Hr1G002600.34 , HORVU7Hr1G002600.39 , HORVU7Hr1G002600.38 , HORVU7Hr1G002600.20 , HORVU7Hr1G002600.21 , HORVU7Hr1G002600.22 , HORVU7Hr1G002600.23 , HORVU7Hr1G002600.24 , HORVU7Hr1G002600.25 , HORVU7Hr1G002600.26 , HORVU7Hr1G002600.27 , HORVU7Hr1G002600.29 , HORVU5Hr1G067230.9 , HORVU5Hr1G067230.8 , HORVU5Hr1G067230.39 , HORVU5Hr1G067230.38 , HORVU5Hr1G067230.31 , HORVU5Hr1G067230.30 , HORVU5Hr1G067230.33 , HORVU5Hr1G067230.32 , HORVU5Hr1G067230.35 , HORVU5Hr1G067230.34 , HORVU5Hr1G067230.37 , HORVU5Hr1G067230.2
Wheat TraesCS7D02G022700 , TraesCS7A02G024800 , TraesCS4A02G464200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331300 AP2 domain containing protein, expressed -
2 Sobic.003G078501 - -
3 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
4 Sobic.001G159850 - -
5 Sobic.001G159850 - -
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
19 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G006700 Sobic010G006700 Sobic004G331300 Sobic004G331300 Sobic010G006700--Sobic004G331300 Sobic003G078501 Sobic003G078501 Sobic010G006700--Sobic003G078501 Sobic009G000700 Sobic009G000700 Sobic010G006700--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G006700--Sobic001G159850 Sobic004G331300--Sobic001G159850 Sobic004G310600 Sobic004G310600 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic001G125100 Sobic001G125100 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic004G155150 Sobic004G155150 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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