Gene annotation
Transcriptome id Sobic.007G166900.1
Synonym Sb07g023970, WAT1
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt C5YN53
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF53
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G75500 : Walls Are Thin 1
RAP-DB (Rice) LOC_Os08g44750.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a035071 , Zm00025a005578 , Zm00025a030526
Brachypodium KQJ88791
Barley HORVU7Hr1G059750.3 , HORVU7Hr1G059750.2 , HORVU7Hr1G059750.1 , HORVU3Hr1G002710.7 , HORVU3Hr1G002710.6 , HORVU3Hr1G002710.5 , HORVU3Hr1G002710.4 , HORVU3Hr1G002710.3 , HORVU3Hr1G002710.1 , HORVU3Hr1G002710.9 , HORVU3Hr1G002710.8 , HORVU3Hr1G001040.4 , HORVU3Hr1G001040.2 , HORVU3Hr1G001040.3 , HORVU3Hr1G001040.1
Wheat TraesCS3D02G003600 , TraesCS3B02G026700 , TraesCS3D02G027300 , TraesCS7A02G281700 , TraesCS7D02G280200 , TraesCS3B02G006900 , TraesCS3A02G007100 , TraesCS3B02G011600 , TraesCS3A02G019600
Populus -


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cDNA sequences
Sobic.007G166900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
2 Sobic.002G427400 COBRA-like protein 7 precursor, putative, expressed -
3 Sobic.004G331300 AP2 domain containing protein, expressed -
4 Sobic.003G373150 - -
5 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
6 Sobic.006G267900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic007G166900 Sobic007G166900 Sobic010G006700 Sobic010G006700 Sobic007G166900--Sobic010G006700 Sobic002G427400 Sobic002G427400 Sobic007G166900--Sobic002G427400 Sobic004G331300 Sobic004G331300 Sobic007G166900--Sobic004G331300 Sobic003G373150 Sobic003G373150 Sobic007G166900--Sobic003G373150 Sobic004G310600 Sobic004G310600 Sobic007G166900--Sobic004G310600 Sobic006G267900 Sobic006G267900 Sobic007G166900--Sobic006G267900 Sobic001G159850 Sobic001G159850 Sobic007G166900--Sobic001G159850 Sobic010G006700--Sobic004G331300 Sobic003G078501 Sobic003G078501 Sobic010G006700--Sobic003G078501 Sobic009G000700 Sobic009G000700 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic002G427400--Sobic007G166900 Sobic001G080300 Sobic001G080300 Sobic002G427400--Sobic001G080300 Sobic008G159100 Sobic008G159100 Sobic002G427400--Sobic008G159100 Sobic004G278200 Sobic004G278200 Sobic002G427400--Sobic004G278200 Sobic002G427400--Sobic003G373150 Sobic002G427400--Sobic010G006700 Sobic003G225900 Sobic003G225900 Sobic002G427400--Sobic003G225900 Sobic003G032900 Sobic003G032900 Sobic002G427400--Sobic003G032900 Sobic002G427400--Sobic006G267900 Sobic004G331300--Sobic001G159850 Sobic003G373150--Sobic004G310600 Sobic001G125100 Sobic001G125100 Sobic003G373150--Sobic001G125100 Sobic003G373150--Sobic009G000700 Sobic003G373150--Sobic010G006700 Sobic004G283201 Sobic004G283201 Sobic003G373150--Sobic004G283201 Sobic003G373150--Sobic003G078501 Sobic006G055600 Sobic006G055600 Sobic003G373150--Sobic006G055600 Sobic003G373150--Sobic006G267900 Sobic003G373150--Sobic004G278200 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G155150 Sobic004G155150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic006G267900--Sobic009G000700 Sobic006G267900--Sobic010G006700 Sobic006G267900--Sobic004G310600 Sobic006G267900--Sobic003G078501 Sobic006G267900--Sobic001G125100 Sobic006G267900--Sobic004G155150 Sobic006G267900--Sobic003G373150 Sobic003G367350 Sobic003G367350 Sobic006G267900--Sobic003G367350 Sobic006G267900--Sobic004G331300 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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