Gene annotation
Transcriptome id Sobic.003G373150.1
Synonym -
Functional annotation -
UniProt A0A1W0W0S5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
2 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
3 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
4 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.004G283201 - -
6 Sobic.003G078501 - -
7 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
8 Sobic.006G267900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
9 Sobic.004G278200 DUF581 domain containing protein, expressed -
10 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
11 Sobic.001G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
12 Sobic.004G331300 AP2 domain containing protein, expressed -
13 Sobic.004G155150 - -
14 Sobic.006G005600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
15 Sobic.003G233900 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic003G373150 Sobic003G373150 Sobic004G310600 Sobic004G310600 Sobic003G373150--Sobic004G310600 Sobic001G125100 Sobic001G125100 Sobic003G373150--Sobic001G125100 Sobic009G000700 Sobic009G000700 Sobic003G373150--Sobic009G000700 Sobic010G006700 Sobic010G006700 Sobic003G373150--Sobic010G006700 Sobic004G283201 Sobic004G283201 Sobic003G373150--Sobic004G283201 Sobic003G078501 Sobic003G078501 Sobic003G373150--Sobic003G078501 Sobic006G055600 Sobic006G055600 Sobic003G373150--Sobic006G055600 Sobic006G267900 Sobic006G267900 Sobic003G373150--Sobic006G267900 Sobic004G278200 Sobic004G278200 Sobic003G373150--Sobic004G278200 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G155150 Sobic004G155150 Sobic004G310600--Sobic004G155150 Sobic004G331300 Sobic004G331300 Sobic004G310600--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic001G125100--Sobic003G078501 Sobic001G125100--Sobic010G006700 Sobic001G125100--Sobic003G373150 Sobic001G159850 Sobic001G159850 Sobic001G125100--Sobic001G159850 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic009G000700--Sobic003G373150 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic004G283201--Sobic006G055600 Sobic006G005600 Sobic006G005600 Sobic004G283201--Sobic006G005600 Sobic004G283201--Sobic003G373150 Sobic006G184800 Sobic006G184800 Sobic004G283201--Sobic006G184800 Sobic001G092600 Sobic001G092600 Sobic004G283201--Sobic001G092600 Sobic004G283300 Sobic004G283300 Sobic004G283201--Sobic004G283300 Sobic010G016500 Sobic010G016500 Sobic004G283201--Sobic010G016500 Sobic004G283201--Sobic001G125100 Sobic009G201500 Sobic009G201500 Sobic004G283201--Sobic009G201500 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic006G055600--Sobic004G283201 Sobic006G055600--Sobic006G005600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G055600--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic006G055600--Sobic009G163900 Sobic004G321000 Sobic004G321000 Sobic006G055600--Sobic004G321000 Sobic006G055600--Sobic004G278200 Sobic006G055600--Sobic009G201500 Sobic006G267900--Sobic009G000700 Sobic006G267900--Sobic010G006700 Sobic006G267900--Sobic004G310600 Sobic006G267900--Sobic003G078501 Sobic006G267900--Sobic001G125100 Sobic006G267900--Sobic004G155150 Sobic006G267900--Sobic003G373150 Sobic003G367350 Sobic003G367350 Sobic006G267900--Sobic003G367350 Sobic006G267900--Sobic004G331300 Sobic004G278200--Sobic003G373150 Sobic007G166900 Sobic007G166900 Sobic004G278200--Sobic007G166900 Sobic004G278200--Sobic006G055600 Sobic001G080300 Sobic001G080300 Sobic004G278200--Sobic001G080300 Sobic002G427400 Sobic002G427400 Sobic004G278200--Sobic002G427400 Sobic004G278200--Sobic004G321000 Sobic001G063600 Sobic001G063600 Sobic004G278200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G278200--Sobic003G032900 Sobic004G278200--Sobic004G283201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.