Gene annotation
Transcriptome id Sobic.006G005600.1
Synonym HSP81.1, HSP83, AtHsp90-1, HSP81-1, HSP90.1, ATHSP90.1, ATHS83, Sb06g000660
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
heat shock protein, putative, expressed
UniProt C5YBL4
Pfam PF02518 PF00183
Panther DB PTHR11528 PTHR11528:SF53
NCBI CDD -
KEGG Orthology K04079; HSP90A, molecular chaperone HtpG
Gene Ontology GO:0006950; response to stress GO:0006457protein folding GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G52640 : heat shock protein 90.1
RAP-DB (Rice) LOC_Os04g01740.1 : heat shock protein, putative, expressed
MaizeGDB (Corn) Zm00025a005014 , Zm00025a033768 , Zm00025a055468
Brachypodium KQJ98864 , KQJ81650 , KQJ98871
Barley HORVU5Hr1G072420.8 , HORVU5Hr1G072420.9 , HORVU5Hr1G072420.5 , HORVU5Hr1G072420.6 , HORVU5Hr1G072420.1 , HORVU5Hr1G072420.2 , HORVU5Hr1G072420.3 , HORVU7Hr1G049370.4 , HORVU7Hr1G049370.5 , HORVU7Hr1G049370.1 , HORVU7Hr1G049370.2 , HORVU7Hr1G049370.3
Wheat TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS5A02G260600 , TraesCS2D02G033200 , TraesCS2D02G033200 , TraesCS2B02G047400 , TraesCS6D02G046900 , TraesCS6D02G046900 , TraesCS7A02G242200 , TraesCS2A02G033700 , TraesCS7B02G149200 , TraesCS5B02G258900 , TraesCS5B02G258900 , TraesCS7D02G241100 , TraesCS7B02G149200 , TraesCS5B02G258900 , TraesCS5B02G258900 , TraesCS5D02G268000 , TraesCS5D02G268000 , TraesCS5D02G268000
Populus -


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cDNA sequences
Sobic.006G005600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
2 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
3 Sobic.004G283201 - -
4 Sobic.009G201500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
5 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
7 Sobic.003G373150 - -
8 Sobic.004G283300 AP2 domain containing protein, expressed -
9 Sobic.004G278200 DUF581 domain containing protein, expressed -
10 Sobic.004G321000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
11 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
12 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
13 Sobic.010G076700 expressed protein -
14 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
15 Sobic.006G267900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
16 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
17 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
18 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.004G245850 - -
20 Sobic.003G078501 - -


Gene co-expression network
sample Sobic006G005600 Sobic006G005600 Sobic006G055600 Sobic006G055600 Sobic006G005600--Sobic006G055600 Sobic001G092600 Sobic001G092600 Sobic006G005600--Sobic001G092600 Sobic004G283201 Sobic004G283201 Sobic006G005600--Sobic004G283201 Sobic009G201500 Sobic009G201500 Sobic006G005600--Sobic009G201500 Sobic009G163900 Sobic009G163900 Sobic006G005600--Sobic009G163900 Sobic006G184800 Sobic006G184800 Sobic006G005600--Sobic006G184800 Sobic003G373150 Sobic003G373150 Sobic006G005600--Sobic003G373150 Sobic004G283300 Sobic004G283300 Sobic006G005600--Sobic004G283300 Sobic004G278200 Sobic004G278200 Sobic006G005600--Sobic004G278200 Sobic006G055600--Sobic004G283201 Sobic006G055600--Sobic006G005600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G055600--Sobic006G184800 Sobic006G055600--Sobic009G163900 Sobic004G321000 Sobic004G321000 Sobic006G055600--Sobic004G321000 Sobic006G055600--Sobic004G278200 Sobic006G055600--Sobic009G201500 Sobic001G092600--Sobic006G005600 Sobic001G092600--Sobic006G055600 Sobic001G092600--Sobic009G163900 Sobic001G092600--Sobic004G283201 Sobic001G092600--Sobic006G184800 Sobic009G231400 Sobic009G231400 Sobic001G092600--Sobic009G231400 Sobic001G092600--Sobic009G201500 Sobic001G092600--Sobic003G373150 Sobic001G092600--Sobic004G321000 Sobic004G283201--Sobic006G055600 Sobic004G283201--Sobic006G005600 Sobic004G283201--Sobic003G373150 Sobic004G283201--Sobic006G184800 Sobic004G283201--Sobic001G092600 Sobic004G283201--Sobic004G283300 Sobic010G016500 Sobic010G016500 Sobic004G283201--Sobic010G016500 Sobic001G125100 Sobic001G125100 Sobic004G283201--Sobic001G125100 Sobic004G283201--Sobic009G201500 Sobic009G201500--Sobic006G005600 Sobic009G201500--Sobic001G092600 Sobic009G201500--Sobic006G055600 Sobic009G201500--Sobic004G283201 Sobic001G286000 Sobic001G286000 Sobic009G201500--Sobic001G286000 Sobic009G201500--Sobic003G373150 Sobic009G201500--Sobic004G321000 Sobic003G233900 Sobic003G233900 Sobic009G201500--Sobic003G233900 Sobic009G201500--Sobic004G283300 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic009G163900--Sobic006G005600 Sobic009G163900--Sobic006G055600 Sobic009G163900--Sobic004G321000 Sobic010G076700 Sobic010G076700 Sobic009G163900--Sobic010G076700 Sobic004G245850 Sobic004G245850 Sobic009G163900--Sobic004G245850 Sobic009G163900--Sobic004G278200 Sobic006G184800--Sobic004G283201 Sobic006G184800--Sobic006G055600 Sobic006G184800--Sobic009G163900 Sobic006G184800--Sobic001G092600 Sobic006G184800--Sobic006G005600 Sobic006G184800--Sobic004G245850 Sobic001G476400 Sobic001G476400 Sobic006G184800--Sobic001G476400 Sobic006G184800--Sobic009G231400 Sobic006G184800--Sobic004G283300 Sobic004G310600 Sobic004G310600 Sobic003G373150--Sobic004G310600 Sobic003G373150--Sobic001G125100 Sobic009G000700 Sobic009G000700 Sobic003G373150--Sobic009G000700 Sobic010G006700 Sobic010G006700 Sobic003G373150--Sobic010G006700 Sobic003G373150--Sobic004G283201 Sobic003G078501 Sobic003G078501 Sobic003G373150--Sobic003G078501 Sobic003G373150--Sobic006G055600 Sobic006G267900 Sobic006G267900 Sobic003G373150--Sobic006G267900 Sobic003G373150--Sobic004G278200 Sobic002G344700 Sobic002G344700 Sobic004G283300--Sobic002G344700 Sobic004G283300--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic004G283300--Sobic001G081600 Sobic004G283300--Sobic004G283201 Sobic009G170100 Sobic009G170100 Sobic004G283300--Sobic009G170100 Sobic006G032200 Sobic006G032200 Sobic004G283300--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic004G283300--Sobic004G281200 Sobic004G283300--Sobic001G476400 Sobic006G210300 Sobic006G210300 Sobic004G283300--Sobic006G210300 Sobic004G278200--Sobic003G373150 Sobic007G166900 Sobic007G166900 Sobic004G278200--Sobic007G166900 Sobic004G278200--Sobic006G055600 Sobic001G080300 Sobic001G080300 Sobic004G278200--Sobic001G080300 Sobic002G427400 Sobic002G427400 Sobic004G278200--Sobic002G427400 Sobic004G278200--Sobic004G321000 Sobic001G063600 Sobic001G063600 Sobic004G278200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G278200--Sobic003G032900 Sobic004G278200--Sobic004G283201
Octagon: transcription factors


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