Gene annotation
Transcriptome id Sobic.006G184800.1
Synonym DREB1D, CBF4, (SbDREB1);ethylene response factor 72, SbERF72, dehydration response element binding (DREB) transcription factor, Sb06g025900
Functional annotation "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. " (PubMedID : 24086146)
Not investigated (PubMedID : 23766026)
dehydration-responsive element-binding protein, putative, expressed
UniProt C5YE48
Pfam PF00847
Panther DB PTHR31839 PTHR31839:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G51990 : C-repeat-binding factor 4
RAP-DB (Rice) LOC_Os04g48350.1 : dehydration-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a010155 , Zm00025a010316 , Zm00025a032201
Brachypodium -
Barley HORVU6Hr1G065580.8 , HORVU6Hr1G065580.4 , HORVU6Hr1G065580.5 , HORVU6Hr1G065580.6 , HORVU6Hr1G065580.7 , HORVU6Hr1G065580.1 , HORVU6Hr1G065580.2 , HORVU6Hr1G065580.3 , HORVU0Hr1G016540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G283201 - -
2 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
3 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
4 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.006G005600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
6 Sobic.004G245850 - -
7 Sobic.001G476400 - -
8 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
9 Sobic.004G283300 AP2 domain containing protein, expressed -
10 Sobic.003G373150 - -
11 Sobic.004G278200 DUF581 domain containing protein, expressed -
12 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
13 Sobic.001G420100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.010G076700 expressed protein -
15 Sobic.004G321000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
18 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
19 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
20 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -


Gene co-expression network
sample Sobic006G184800 Sobic006G184800 Sobic004G283201 Sobic004G283201 Sobic006G184800--Sobic004G283201 Sobic006G055600 Sobic006G055600 Sobic006G184800--Sobic006G055600 Sobic009G163900 Sobic009G163900 Sobic006G184800--Sobic009G163900 Sobic001G092600 Sobic001G092600 Sobic006G184800--Sobic001G092600 Sobic006G005600 Sobic006G005600 Sobic006G184800--Sobic006G005600 Sobic004G245850 Sobic004G245850 Sobic006G184800--Sobic004G245850 Sobic001G476400 Sobic001G476400 Sobic006G184800--Sobic001G476400 Sobic009G231400 Sobic009G231400 Sobic006G184800--Sobic009G231400 Sobic004G283300 Sobic004G283300 Sobic006G184800--Sobic004G283300 Sobic004G283201--Sobic006G055600 Sobic004G283201--Sobic006G005600 Sobic003G373150 Sobic003G373150 Sobic004G283201--Sobic003G373150 Sobic004G283201--Sobic006G184800 Sobic004G283201--Sobic001G092600 Sobic004G283201--Sobic004G283300 Sobic010G016500 Sobic010G016500 Sobic004G283201--Sobic010G016500 Sobic001G125100 Sobic001G125100 Sobic004G283201--Sobic001G125100 Sobic009G201500 Sobic009G201500 Sobic004G283201--Sobic009G201500 Sobic006G055600--Sobic004G283201 Sobic006G055600--Sobic006G005600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G055600--Sobic006G184800 Sobic006G055600--Sobic009G163900 Sobic004G321000 Sobic004G321000 Sobic006G055600--Sobic004G321000 Sobic004G278200 Sobic004G278200 Sobic006G055600--Sobic004G278200 Sobic006G055600--Sobic009G201500 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic009G163900--Sobic006G005600 Sobic009G163900--Sobic006G055600 Sobic009G163900--Sobic004G321000 Sobic010G076700 Sobic010G076700 Sobic009G163900--Sobic010G076700 Sobic009G163900--Sobic004G245850 Sobic009G163900--Sobic004G278200 Sobic001G092600--Sobic006G005600 Sobic001G092600--Sobic006G055600 Sobic001G092600--Sobic009G163900 Sobic001G092600--Sobic004G283201 Sobic001G092600--Sobic006G184800 Sobic001G092600--Sobic009G231400 Sobic001G092600--Sobic009G201500 Sobic001G092600--Sobic003G373150 Sobic001G092600--Sobic004G321000 Sobic006G005600--Sobic006G055600 Sobic006G005600--Sobic001G092600 Sobic006G005600--Sobic004G283201 Sobic006G005600--Sobic009G201500 Sobic006G005600--Sobic009G163900 Sobic006G005600--Sobic006G184800 Sobic006G005600--Sobic003G373150 Sobic006G005600--Sobic004G283300 Sobic006G005600--Sobic004G278200 Sobic004G245850--Sobic006G184800 Sobic004G245850--Sobic009G163900 Sobic004G245850--Sobic006G055600 Sobic008G159100 Sobic008G159100 Sobic004G245850--Sobic008G159100 Sobic001G093200 Sobic001G093200 Sobic004G245850--Sobic001G093200 Sobic004G245850--Sobic004G283201 Sobic002G427400 Sobic002G427400 Sobic004G245850--Sobic002G427400 Sobic004G245850--Sobic001G092600 Sobic004G245850--Sobic004G278200 Sobic001G063600 Sobic001G063600 Sobic001G476400--Sobic001G063600 Sobic001G051600 Sobic001G051600 Sobic001G476400--Sobic001G051600 Sobic001G473900 Sobic001G473900 Sobic001G476400--Sobic001G473900 Sobic010G076600 Sobic010G076600 Sobic001G476400--Sobic010G076600 Sobic001G081600 Sobic001G081600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic006G095600 Sobic006G095600 Sobic001G476400--Sobic006G095600 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600 Sobic009G231400--Sobic009G163900 Sobic009G231400--Sobic001G093200 Sobic001G420100 Sobic001G420100 Sobic009G231400--Sobic001G420100 Sobic009G231400--Sobic010G076700 Sobic009G231400--Sobic001G092600 Sobic003G350700 Sobic003G350700 Sobic009G231400--Sobic003G350700 Sobic009G231400--Sobic006G184800 Sobic005G122500 Sobic005G122500 Sobic009G231400--Sobic005G122500 Sobic002G203000 Sobic002G203000 Sobic009G231400--Sobic002G203000 Sobic002G344700 Sobic002G344700 Sobic004G283300--Sobic002G344700 Sobic004G283300--Sobic010G016500 Sobic004G283300--Sobic001G081600 Sobic004G283300--Sobic004G283201 Sobic009G170100 Sobic009G170100 Sobic004G283300--Sobic009G170100 Sobic006G032200 Sobic006G032200 Sobic004G283300--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic004G283300--Sobic004G281200 Sobic004G283300--Sobic001G476400 Sobic006G210300 Sobic006G210300 Sobic004G283300--Sobic006G210300
Octagon: transcription factors


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