Gene annotation
Transcriptome id Sobic.001G092600.1
Synonym BIL4, Sb01g008350
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
transmembrane BAX inhibitor motif-containing protein, putative, expressed
UniProt C5X172
Pfam PF01027
Panther DB PTHR23291 PTHR23291:SF31
NCBI CDD KOG2322; N-methyl-D-aspartate receptor glutamate-binding subunit
KEGG Orthology K06890; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03070 : Bax inhibitor-1 family protein
RAP-DB (Rice) LOC_Os03g53400.1 : transmembrane BAX inhibitor motif-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a045157 , Zm00025a008117 , Zm00025a016577 , Zm00025a016822 , Zm00025a008555
Brachypodium KQK13246
Barley HORVU5Hr1G105760.2 , HORVU5Hr1G105760.1 , HORVU3Hr1G104710.2 , HORVU3Hr1G104660.2 , HORVU3Hr1G104660.1 , HORVU3Hr1G104710.1 , HORVU5Hr1G044320.1 , HORVU5Hr1G037150.1 , HORVU5Hr1G094490.1 , HORVU5Hr1G094490.2
Wheat TraesCS5D02G393600 , TraesCS5D02G444900 , TraesCS5B02G440500 , TraesCS5B02G388900 , TraesCS5A02G437700 , TraesCS5A02G384100 , TraesCS5D02G445000
Populus -


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cDNA sequences
Sobic.001G092600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G005600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
2 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
3 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
4 Sobic.004G283201 - -
5 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
6 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
7 Sobic.009G201500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
8 Sobic.003G373150 - -
9 Sobic.004G321000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
10 Sobic.004G283300 AP2 domain containing protein, expressed -
11 Sobic.010G076700 expressed protein -
12 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
13 Sobic.004G278200 DUF581 domain containing protein, expressed -
14 Sobic.004G245850 - -
15 Sobic.001G476400 - -
16 Sobic.001G420100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
17 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
18 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G093200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic001G092600 Sobic001G092600 Sobic006G005600 Sobic006G005600 Sobic001G092600--Sobic006G005600 Sobic006G055600 Sobic006G055600 Sobic001G092600--Sobic006G055600 Sobic009G163900 Sobic009G163900 Sobic001G092600--Sobic009G163900 Sobic004G283201 Sobic004G283201 Sobic001G092600--Sobic004G283201 Sobic006G184800 Sobic006G184800 Sobic001G092600--Sobic006G184800 Sobic009G231400 Sobic009G231400 Sobic001G092600--Sobic009G231400 Sobic009G201500 Sobic009G201500 Sobic001G092600--Sobic009G201500 Sobic003G373150 Sobic003G373150 Sobic001G092600--Sobic003G373150 Sobic004G321000 Sobic004G321000 Sobic001G092600--Sobic004G321000 Sobic006G005600--Sobic006G055600 Sobic006G005600--Sobic001G092600 Sobic006G005600--Sobic004G283201 Sobic006G005600--Sobic009G201500 Sobic006G005600--Sobic009G163900 Sobic006G005600--Sobic006G184800 Sobic006G005600--Sobic003G373150 Sobic004G283300 Sobic004G283300 Sobic006G005600--Sobic004G283300 Sobic004G278200 Sobic004G278200 Sobic006G005600--Sobic004G278200 Sobic006G055600--Sobic004G283201 Sobic006G055600--Sobic006G005600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G055600--Sobic006G184800 Sobic006G055600--Sobic009G163900 Sobic006G055600--Sobic004G321000 Sobic006G055600--Sobic004G278200 Sobic006G055600--Sobic009G201500 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic009G163900--Sobic006G005600 Sobic009G163900--Sobic006G055600 Sobic009G163900--Sobic004G321000 Sobic010G076700 Sobic010G076700 Sobic009G163900--Sobic010G076700 Sobic004G245850 Sobic004G245850 Sobic009G163900--Sobic004G245850 Sobic009G163900--Sobic004G278200 Sobic004G283201--Sobic006G055600 Sobic004G283201--Sobic006G005600 Sobic004G283201--Sobic003G373150 Sobic004G283201--Sobic006G184800 Sobic004G283201--Sobic001G092600 Sobic004G283201--Sobic004G283300 Sobic010G016500 Sobic010G016500 Sobic004G283201--Sobic010G016500 Sobic001G125100 Sobic001G125100 Sobic004G283201--Sobic001G125100 Sobic004G283201--Sobic009G201500 Sobic006G184800--Sobic004G283201 Sobic006G184800--Sobic006G055600 Sobic006G184800--Sobic009G163900 Sobic006G184800--Sobic001G092600 Sobic006G184800--Sobic006G005600 Sobic006G184800--Sobic004G245850 Sobic001G476400 Sobic001G476400 Sobic006G184800--Sobic001G476400 Sobic006G184800--Sobic009G231400 Sobic006G184800--Sobic004G283300 Sobic009G231400--Sobic009G163900 Sobic001G093200 Sobic001G093200 Sobic009G231400--Sobic001G093200 Sobic001G420100 Sobic001G420100 Sobic009G231400--Sobic001G420100 Sobic009G231400--Sobic010G076700 Sobic009G231400--Sobic001G092600 Sobic003G350700 Sobic003G350700 Sobic009G231400--Sobic003G350700 Sobic009G231400--Sobic006G184800 Sobic005G122500 Sobic005G122500 Sobic009G231400--Sobic005G122500 Sobic002G203000 Sobic002G203000 Sobic009G231400--Sobic002G203000 Sobic009G201500--Sobic006G005600 Sobic009G201500--Sobic001G092600 Sobic009G201500--Sobic006G055600 Sobic009G201500--Sobic004G283201 Sobic001G286000 Sobic001G286000 Sobic009G201500--Sobic001G286000 Sobic009G201500--Sobic003G373150 Sobic009G201500--Sobic004G321000 Sobic003G233900 Sobic003G233900 Sobic009G201500--Sobic003G233900 Sobic009G201500--Sobic004G283300 Sobic004G310600 Sobic004G310600 Sobic003G373150--Sobic004G310600 Sobic003G373150--Sobic001G125100 Sobic009G000700 Sobic009G000700 Sobic003G373150--Sobic009G000700 Sobic010G006700 Sobic010G006700 Sobic003G373150--Sobic010G006700 Sobic003G373150--Sobic004G283201 Sobic003G078501 Sobic003G078501 Sobic003G373150--Sobic003G078501 Sobic003G373150--Sobic006G055600 Sobic006G267900 Sobic006G267900 Sobic003G373150--Sobic006G267900 Sobic003G373150--Sobic004G278200 Sobic004G321000--Sobic006G055600 Sobic004G321000--Sobic009G163900 Sobic004G321000--Sobic004G278200 Sobic004G321000--Sobic003G373150 Sobic004G321000--Sobic006G005600 Sobic004G321000--Sobic001G092600 Sobic004G321000--Sobic009G201500 Sobic004G321000--Sobic004G283201 Sobic004G321000--Sobic006G184800
Octagon: transcription factors


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