Gene annotation
Transcriptome id Sobic.010G076700.1
Synonym Sb10g006640
Functional annotation expressed protein
UniProt A0A194YHW5
Pfam PF02431
Panther DB PTHR28039 PTHR28039:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016872; intramolecular lyase activity


Orthologs (automatic annotation)
TAIR AT2G26310 : Chalcone-flavanone isomerase family protein
RAP-DB (Rice) LOC_Os06g10210.2 : expressed protein
MaizeGDB (Corn) Zm00025a049631
Brachypodium KQK19118
Barley HORVU7Hr1G034350.6 , HORVU7Hr1G034350.7 , HORVU7Hr1G034350.4 , HORVU7Hr1G034350.5 , HORVU7Hr1G034350.2 , HORVU7Hr1G034350.3 , HORVU7Hr1G034350.1 , HORVU7Hr1G034350.8 , HORVU7Hr1G034350.9 , HORVU7Hr1G034350.10 , HORVU7Hr1G034350.11 , HORVU7Hr1G034350.12
Wheat TraesCS7A02G163700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
2 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
4 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
5 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G476400 - -
7 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
8 Sobic.004G283300 AP2 domain containing protein, expressed -
9 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.001G489600 expressed protein -
11 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
14 Sobic.002G248100 expressed protein -
15 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
16 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
17 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
18 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
19 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic010G076700 Sobic010G076700 Sobic009G071800 Sobic009G071800 Sobic010G076700--Sobic009G071800 Sobic002G203000 Sobic002G203000 Sobic010G076700--Sobic002G203000 Sobic009G231400 Sobic009G231400 Sobic010G076700--Sobic009G231400 Sobic006G095600 Sobic006G095600 Sobic010G076700--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic010G076700--Sobic001G077700 Sobic001G476400 Sobic001G476400 Sobic010G076700--Sobic001G476400 Sobic009G163900 Sobic009G163900 Sobic010G076700--Sobic009G163900 Sobic004G283300 Sobic004G283300 Sobic010G076700--Sobic004G283300 Sobic004G025000 Sobic004G025000 Sobic010G076700--Sobic004G025000 Sobic009G071800--Sobic001G077700 Sobic009G071800--Sobic002G203000 Sobic010G234600 Sobic010G234600 Sobic009G071800--Sobic010G234600 Sobic002G248100 Sobic002G248100 Sobic009G071800--Sobic002G248100 Sobic002G294700 Sobic002G294700 Sobic009G071800--Sobic002G294700 Sobic009G071800--Sobic010G076700 Sobic001G398500 Sobic001G398500 Sobic009G071800--Sobic001G398500 Sobic001G473900 Sobic001G473900 Sobic009G071800--Sobic001G473900 Sobic009G071800--Sobic006G095600 Sobic002G203000--Sobic001G077700 Sobic002G203000--Sobic009G071800 Sobic002G203000--Sobic006G095600 Sobic001G489600 Sobic001G489600 Sobic002G203000--Sobic001G489600 Sobic002G203000--Sobic010G076700 Sobic009G258300 Sobic009G258300 Sobic002G203000--Sobic009G258300 Sobic002G203000--Sobic001G473900 Sobic007G057100 Sobic007G057100 Sobic002G203000--Sobic007G057100 Sobic002G203000--Sobic002G248100 Sobic009G231400--Sobic009G163900 Sobic001G093200 Sobic001G093200 Sobic009G231400--Sobic001G093200 Sobic001G420100 Sobic001G420100 Sobic009G231400--Sobic001G420100 Sobic009G231400--Sobic010G076700 Sobic001G092600 Sobic001G092600 Sobic009G231400--Sobic001G092600 Sobic003G350700 Sobic003G350700 Sobic009G231400--Sobic003G350700 Sobic006G184800 Sobic006G184800 Sobic009G231400--Sobic006G184800 Sobic005G122500 Sobic005G122500 Sobic009G231400--Sobic005G122500 Sobic009G231400--Sobic002G203000 Sobic006G095600--Sobic001G489600 Sobic006G095600--Sobic002G203000 Sobic001G051600 Sobic001G051600 Sobic006G095600--Sobic001G051600 Sobic006G095600--Sobic001G077700 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400 Sobic001G077700--Sobic009G071800 Sobic001G077700--Sobic010G234600 Sobic001G077700--Sobic002G203000 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic001G077700--Sobic008G177800 Sobic004G286600 Sobic004G286600 Sobic001G077700--Sobic004G286600 Sobic010G234700 Sobic010G234700 Sobic001G077700--Sobic010G234700 Sobic001G077700--Sobic001G489600 Sobic001G063600 Sobic001G063600 Sobic001G476400--Sobic001G063600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic010G076600 Sobic010G076600 Sobic001G476400--Sobic010G076600 Sobic001G081600 Sobic001G081600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic001G476400--Sobic004G283300 Sobic001G476400--Sobic001G489600 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic006G005600 Sobic006G005600 Sobic009G163900--Sobic006G005600 Sobic006G055600 Sobic006G055600 Sobic009G163900--Sobic006G055600 Sobic004G321000 Sobic004G321000 Sobic009G163900--Sobic004G321000 Sobic009G163900--Sobic010G076700 Sobic004G245850 Sobic004G245850 Sobic009G163900--Sobic004G245850 Sobic004G278200 Sobic004G278200 Sobic009G163900--Sobic004G278200 Sobic002G344700 Sobic002G344700 Sobic004G283300--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic004G283300--Sobic010G016500 Sobic004G283300--Sobic001G081600 Sobic004G283201 Sobic004G283201 Sobic004G283300--Sobic004G283201 Sobic009G170100 Sobic009G170100 Sobic004G283300--Sobic009G170100 Sobic006G032200 Sobic006G032200 Sobic004G283300--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic004G283300--Sobic004G281200 Sobic004G283300--Sobic001G476400 Sobic006G210300 Sobic006G210300 Sobic004G283300--Sobic006G210300 Sobic004G025000--Sobic001G081600 Sobic002G379400 Sobic002G379400 Sobic004G025000--Sobic002G379400 Sobic004G025000--Sobic006G095600 Sobic004G025000--Sobic002G344700 Sobic002G330300 Sobic002G330300 Sobic004G025000--Sobic002G330300 Sobic004G025000--Sobic001G476400 Sobic004G025000--Sobic001G063600 Sobic001G314700 Sobic001G314700 Sobic004G025000--Sobic001G314700 Sobic004G025000--Sobic010G076700
Octagon: transcription factors


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