Gene annotation
Transcriptome id Sobic.009G208800.1
Synonym Sb09g026520
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt C5YUF7
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28240 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os05g45490.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a044251 , Zm00025a038016
Brachypodium KQK05349 , KQK05237 , KQK05236
Barley HORVU0Hr1G001460.2 , HORVU0Hr1G001460.1
Wheat TraesCS1D02G354900 , TraesCS1A02G355500 , TraesCS1B02G366100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
2 Sobic.004G257300 GPI-anchored protein, putative, expressed -
3 Sobic.009G220200 exostosin family domain containing protein, expressed -
4 Sobic.003G296700 protein kinase domain containing protein, expressed -
5 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
6 Sobic.007G057100 expressed protein -
7 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
8 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
9 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
10 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
12 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
13 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
15 Sobic.010G076700 expressed protein -
16 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
17 Sobic.010G105800 calmodulin-binding heat-shock protein, putative, expressed -
18 Sobic.002G362900 IBS1, putative, expressed -
19 Sobic.006G131400 expressed protein -
20 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic009G208800 Sobic009G208800 Sobic001G173300 Sobic001G173300 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G220200 Sobic009G220200 Sobic009G208800--Sobic009G220200 Sobic003G296700 Sobic003G296700 Sobic009G208800--Sobic003G296700 Sobic001G516600 Sobic001G516600 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic002G294700 Sobic002G294700 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic008G177800 Sobic008G177800 Sobic009G208800--Sobic008G177800 Sobic001G173300--Sobic001G516600 Sobic001G173300--Sobic004G257300 Sobic004G036600 Sobic004G036600 Sobic001G173300--Sobic004G036600 Sobic001G173300--Sobic009G208800 Sobic001G084100 Sobic001G084100 Sobic001G173300--Sobic001G084100 Sobic010G065900 Sobic010G065900 Sobic001G173300--Sobic010G065900 Sobic007G151100 Sobic007G151100 Sobic001G173300--Sobic007G151100 Sobic009G027900 Sobic009G027900 Sobic001G173300--Sobic009G027900 Sobic005G168100 Sobic005G168100 Sobic001G173300--Sobic005G168100 Sobic004G257300--Sobic001G173300 Sobic010G030900 Sobic010G030900 Sobic004G257300--Sobic010G030900 Sobic004G257300--Sobic009G208800 Sobic004G257300--Sobic002G294700 Sobic004G257300--Sobic008G177800 Sobic004G257300--Sobic004G036600 Sobic006G205600 Sobic006G205600 Sobic004G257300--Sobic006G205600 Sobic004G286600 Sobic004G286600 Sobic004G257300--Sobic004G286600 Sobic001G489600 Sobic001G489600 Sobic004G257300--Sobic001G489600 Sobic009G220200--Sobic009G208800 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic009G220200--Sobic001G516600 Sobic009G220200--Sobic001G173300 Sobic009G220200--Sobic004G257300 Sobic002G374100 Sobic002G374100 Sobic009G220200--Sobic002G374100 Sobic002G362900 Sobic002G362900 Sobic009G220200--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic009G220200--Sobic007G188100 Sobic003G296700--Sobic001G516600 Sobic003G296700--Sobic009G208800 Sobic003G296700--Sobic009G220200 Sobic001G341600 Sobic001G341600 Sobic003G296700--Sobic001G341600 Sobic009G217600 Sobic009G217600 Sobic003G296700--Sobic009G217600 Sobic010G076600 Sobic010G076600 Sobic003G296700--Sobic010G076600 Sobic006G095600 Sobic006G095600 Sobic003G296700--Sobic006G095600 Sobic003G296700--Sobic002G374100 Sobic003G296700--Sobic002G294700 Sobic001G516600--Sobic001G173300 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G532200 Sobic001G532200 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic001G516600--Sobic008G177800 Sobic002G245100 Sobic002G245100 Sobic001G516600--Sobic002G245100 Sobic007G057100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic007G057100--Sobic006G095600 Sobic007G057100--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic007G057100--Sobic001G077700 Sobic001G051600 Sobic001G051600 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic001G473900 Sobic001G473900 Sobic007G057100--Sobic001G473900 Sobic002G294700--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic006G087900 Sobic006G087900 Sobic005G231700--Sobic006G087900 Sobic001G063600 Sobic001G063600 Sobic005G231700--Sobic001G063600 Sobic002G325900 Sobic002G325900 Sobic005G231700--Sobic002G325900 Sobic005G231700--Sobic003G296700 Sobic010G080400 Sobic010G080400 Sobic005G231700--Sobic010G080400 Sobic005G231700--Sobic009G208800 Sobic008G159100 Sobic008G159100 Sobic005G231700--Sobic008G159100 Sobic002G337800 Sobic002G337800 Sobic005G231700--Sobic002G337800 Sobic004G025000 Sobic004G025000 Sobic005G231700--Sobic004G025000 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic008G177800--Sobic004G286600 Sobic002G415600 Sobic002G415600 Sobic008G177800--Sobic002G415600 Sobic010G217800 Sobic010G217800 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic006G230900 Sobic006G230900 Sobic008G177800--Sobic006G230900 Sobic008G177800--Sobic001G077700
Octagon: transcription factors


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