Gene annotation
Transcriptome id Sobic.001G513700.1
Synonym bHLH093, Sb01g047940
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
BHLH transcription factor, putative, expressed
UniProt C5WZ04
Pfam PF00010
Panther DB PTHR31945 PTHR31945:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65640 : beta HLH protein 93
RAP-DB (Rice) LOC_Os03g04310.1 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a000487 , Zm00025a018515 , Zm00025a041707
Brachypodium KQK23774 , KQK16691 , KQK16690
Barley HORVU3Hr1G034540.18 , HORVU3Hr1G034540.26 , HORVU3Hr1G034540.27 , HORVU3Hr1G034540.24 , HORVU3Hr1G034540.25 , HORVU3Hr1G034540.22 , HORVU3Hr1G034540.23 , HORVU3Hr1G034540.20 , HORVU3Hr1G034540.21 , HORVU3Hr1G034540.28 , HORVU3Hr1G034540.29 , HORVU3Hr1G034540.19 , HORVU3Hr1G034540.17 , HORVU3Hr1G034540.16 , HORVU3Hr1G034540.15 , HORVU3Hr1G034540.14 , HORVU3Hr1G034540.13 , HORVU3Hr1G034540.12 , HORVU3Hr1G034540.11 , HORVU3Hr1G034540.10 , HORVU3Hr1G034540.7 , HORVU3Hr1G034540.6 , HORVU3Hr1G034540.5 , HORVU3Hr1G034540.4 , HORVU3Hr1G034540.3 , HORVU3Hr1G034540.2 , HORVU3Hr1G034540.1 , HORVU3Hr1G034540.9 , HORVU3Hr1G034540.8 , HORVU7Hr1G118860.1 , HORVU4Hr1G080890.1 , HORVU4Hr1G080890.3 , HORVU4Hr1G080890.2 , HORVU4Hr1G080890.4 , HORVU4Hr1G032690.2 , HORVU3Hr1G034540.31 , HORVU3Hr1G034540.30 , HORVU3Hr1G034540.32 , HORVU7Hr1G118740.1 , HORVU7Hr1G118740.2 , HORVU7Hr1G118740.3
Wheat TraesCS7B02G465400 , TraesCS7A02G543300 , TraesCS5A02G503300 , TraesCS4D02G328900 , TraesCS4B02G332000 , TraesCS4D02G329000 , TraesCS4D02G329000 , TraesCS5A02G503400 , TraesCSU02G069300 , TraesCS7D02G529200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
2 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
4 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
5 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
6 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
7 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
8 Sobic.007G057100 expressed protein -
9 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
10 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
11 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
12 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
14 Sobic.001G538866 - -
15 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.006G026700 expressed protein -
17 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.003G296700 protein kinase domain containing protein, expressed -
20 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -


Gene co-expression network
sample Sobic001G513700 Sobic001G513700 Sobic008G177800 Sobic008G177800 Sobic001G513700--Sobic008G177800 Sobic007G151100 Sobic007G151100 Sobic001G513700--Sobic007G151100 Sobic002G036100 Sobic002G036100 Sobic001G513700--Sobic002G036100 Sobic001G516600 Sobic001G516600 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic006G231100 Sobic006G231100 Sobic001G513700--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic001G513700--Sobic002G294700 Sobic007G057100 Sobic007G057100 Sobic001G513700--Sobic007G057100 Sobic006G089300 Sobic006G089300 Sobic001G513700--Sobic006G089300 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic010G234600 Sobic010G234600 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic002G415600 Sobic002G415600 Sobic008G177800--Sobic002G415600 Sobic010G217800 Sobic010G217800 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic006G230900 Sobic006G230900 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic002G140300 Sobic002G140300 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic007G151100--Sobic001G513700 Sobic007G151100--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200 Sobic001G173300 Sobic001G173300 Sobic001G516600--Sobic001G173300 Sobic001G516600--Sobic007G151100 Sobic003G037800 Sobic003G037800 Sobic001G516600--Sobic003G037800 Sobic003G296700 Sobic003G296700 Sobic001G516600--Sobic003G296700 Sobic010G268400 Sobic010G268400 Sobic001G516600--Sobic010G268400 Sobic001G516600--Sobic001G532200 Sobic006G131400 Sobic006G131400 Sobic001G516600--Sobic006G131400 Sobic001G516600--Sobic008G177800 Sobic001G516600--Sobic002G245100 Sobic001G532200--Sobic001G516600 Sobic001G084100 Sobic001G084100 Sobic001G532200--Sobic001G084100 Sobic004G212300 Sobic004G212300 Sobic001G532200--Sobic004G212300 Sobic001G532200--Sobic001G513700 Sobic009G248500 Sobic009G248500 Sobic001G532200--Sobic009G248500 Sobic001G532200--Sobic007G151100 Sobic010G052200 Sobic010G052200 Sobic001G532200--Sobic010G052200 Sobic009G073300 Sobic009G073300 Sobic001G532200--Sobic009G073300 Sobic009G027900 Sobic009G027900 Sobic001G532200--Sobic009G027900 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic006G231100--Sobic010G234600 Sobic006G231100--Sobic004G286600 Sobic006G231100--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic006G231100--Sobic002G282300 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic001G489600 Sobic001G489600 Sobic007G057100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic007G057100--Sobic002G203000 Sobic007G057100--Sobic001G513700 Sobic006G095600 Sobic006G095600 Sobic007G057100--Sobic006G095600 Sobic007G057100--Sobic004G286600 Sobic007G057100--Sobic001G077700 Sobic001G051600 Sobic001G051600 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic001G473900 Sobic001G473900 Sobic007G057100--Sobic001G473900 Sobic006G089300--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G089300--Sobic002G359300 Sobic006G179500 Sobic006G179500 Sobic006G089300--Sobic006G179500 Sobic006G228300 Sobic006G228300 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic010G200700 Sobic010G200700 Sobic006G089300--Sobic010G200700 Sobic006G089300--Sobic002G036100 Sobic006G089300--Sobic007G151100
Octagon: transcription factors


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