Gene annotation
Transcriptome id Sobic.006G026700.1
Synonym Sb06g002520
Functional annotation expressed protein
UniProt C5YCR9
Pfam -
Panther DB PTHR36040:SF2 PTHR36040
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g11030.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
2 Sobic.010G078600 - -
3 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
5 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
6 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
8 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.005G111400 lipase, putative, expressed -
10 Sobic.001G538866 - -
11 Sobic.005G037000 cytochrome P450, putative, expressed -
12 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
13 Sobic.010G036800 expressed protein -
14 Sobic.006G274300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
17 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
19 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
20 Sobic.010G175200 low-affinity cation transporter, putative, expressed -


Gene co-expression network
sample Sobic006G026700 Sobic006G026700 Sobic001G513700 Sobic001G513700 Sobic006G026700--Sobic001G513700 Sobic010G078600 Sobic010G078600 Sobic006G026700--Sobic010G078600 Sobic008G036000 Sobic008G036000 Sobic006G026700--Sobic008G036000 Sobic002G036100 Sobic002G036100 Sobic006G026700--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic006G026700--Sobic001G077400 Sobic001G209800 Sobic001G209800 Sobic006G026700--Sobic001G209800 Sobic006G228300 Sobic006G228300 Sobic006G026700--Sobic006G228300 Sobic004G280900 Sobic004G280900 Sobic006G026700--Sobic004G280900 Sobic005G111400 Sobic005G111400 Sobic006G026700--Sobic005G111400 Sobic008G177800 Sobic008G177800 Sobic001G513700--Sobic008G177800 Sobic007G151100 Sobic007G151100 Sobic001G513700--Sobic007G151100 Sobic001G513700--Sobic002G036100 Sobic001G516600 Sobic001G516600 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic006G231100 Sobic006G231100 Sobic001G513700--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic001G513700--Sobic002G294700 Sobic007G057100 Sobic007G057100 Sobic001G513700--Sobic007G057100 Sobic006G089300 Sobic006G089300 Sobic001G513700--Sobic006G089300 Sobic010G078600--Sobic006G026700 Sobic010G036800 Sobic010G036800 Sobic010G078600--Sobic010G036800 Sobic004G195300 Sobic004G195300 Sobic010G078600--Sobic004G195300 Sobic010G078600--Sobic006G089300 Sobic003G423500 Sobic003G423500 Sobic010G078600--Sobic003G423500 Sobic010G078600--Sobic002G036100 Sobic003G158500 Sobic003G158500 Sobic010G078600--Sobic003G158500 Sobic010G078600--Sobic007G151100 Sobic003G035700 Sobic003G035700 Sobic010G078600--Sobic003G035700 Sobic002G197600 Sobic002G197600 Sobic008G036000--Sobic002G197600 Sobic008G036000--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic008G036000--Sobic003G268700 Sobic010G076600 Sobic010G076600 Sobic008G036000--Sobic010G076600 Sobic003G158600 Sobic003G158600 Sobic008G036000--Sobic003G158600 Sobic001G462800 Sobic001G462800 Sobic008G036000--Sobic001G462800 Sobic008G036000--Sobic001G077400 Sobic004G084100 Sobic004G084100 Sobic008G036000--Sobic004G084100 Sobic008G036000--Sobic002G036100 Sobic002G036100--Sobic001G077400 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic006G165100 Sobic006G165100 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200 Sobic001G077400--Sobic004G280900 Sobic005G037000 Sobic005G037000 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic001G077400--Sobic001G441100 Sobic009G217600 Sobic009G217600 Sobic001G077400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic001G077400--Sobic006G165100 Sobic001G341600 Sobic001G341600 Sobic001G077400--Sobic001G341600 Sobic001G209800--Sobic001G077400 Sobic001G209800--Sobic004G280900 Sobic001G209800--Sobic009G217600 Sobic001G209800--Sobic001G035000 Sobic001G209800--Sobic005G037000 Sobic001G209800--Sobic001G441100 Sobic001G209800--Sobic010G076600 Sobic001G209800--Sobic001G341600 Sobic006G274300 Sobic006G274300 Sobic001G209800--Sobic006G274300 Sobic006G228300--Sobic006G089300 Sobic010G200700 Sobic010G200700 Sobic006G228300--Sobic010G200700 Sobic006G179500 Sobic006G179500 Sobic006G228300--Sobic006G179500 Sobic006G228300--Sobic001G040200 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic002G131800 Sobic002G131800 Sobic006G228300--Sobic002G131800 Sobic006G228300--Sobic001G341600 Sobic004G280900--Sobic001G077400 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic004G280900--Sobic001G209800 Sobic004G280900--Sobic001G441100 Sobic004G280900--Sobic002G036100 Sobic004G280900--Sobic002G140300 Sobic004G280900--Sobic001G538866 Sobic004G280900--Sobic001G341600 Sobic006G211400 Sobic006G211400 Sobic005G111400--Sobic006G211400 Sobic005G111400--Sobic010G036800 Sobic005G111400--Sobic006G026700 Sobic005G111400--Sobic008G036000 Sobic004G051166 Sobic004G051166 Sobic005G111400--Sobic004G051166 Sobic005G111400--Sobic004G084100 Sobic006G101100 Sobic006G101100 Sobic005G111400--Sobic006G101100 Sobic005G111400--Sobic002G036100 Sobic009G197600 Sobic009G197600 Sobic005G111400--Sobic009G197600
Octagon: transcription factors


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