Gene annotation
Transcriptome id Sobic.010G175200.5,Sobic.010G175200.6,Sobic.010G175200.3,Sobic.010G175200.1,Sobic.010G175200.2,Sobic.010G175200.4
Synonym Sb10g022747
Functional annotation low-affinity cation transporter, putative, expressed
UniProt A0A1W0VTL6 , A0A194YJU2 , A0A1W0VTK6 , A0A194YJW4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g38120.1 : low-affinity cation transporter, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
2 Sobic.004G042600 protein kinase domain containing protein, expressed -
3 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
4 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
5 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
6 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
8 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
9 Sobic.010G078600 - -
10 Sobic.006G026700 expressed protein -
11 Sobic.002G379866 - -
12 Sobic.003G035700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.007G145700 expressed protein -
14 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
16 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
18 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
20 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -


Gene co-expression network
sample Sobic010G175200 Sobic010G175200 Sobic004G297200 Sobic004G297200 Sobic010G175200--Sobic004G297200 Sobic004G042600 Sobic004G042600 Sobic010G175200--Sobic004G042600 Sobic006G078400 Sobic006G078400 Sobic010G175200--Sobic006G078400 Sobic009G044400 Sobic009G044400 Sobic010G175200--Sobic009G044400 Sobic003G341100 Sobic003G341100 Sobic010G175200--Sobic003G341100 Sobic010G200700 Sobic010G200700 Sobic010G175200--Sobic010G200700 Sobic003G363200 Sobic003G363200 Sobic010G175200--Sobic003G363200 Sobic003G158600 Sobic003G158600 Sobic010G175200--Sobic003G158600 Sobic010G078600 Sobic010G078600 Sobic010G175200--Sobic010G078600 Sobic004G297200--Sobic010G200700 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic003G012800 Sobic003G012800 Sobic004G297200--Sobic003G012800 Sobic004G297200--Sobic003G363200 Sobic009G066800 Sobic009G066800 Sobic004G297200--Sobic009G066800 Sobic004G297200--Sobic009G044400 Sobic004G042600--Sobic010G200700 Sobic004G042600--Sobic004G297200 Sobic002G080000 Sobic002G080000 Sobic004G042600--Sobic002G080000 Sobic004G042600--Sobic010G175200 Sobic006G228300 Sobic006G228300 Sobic004G042600--Sobic006G228300 Sobic004G042600--Sobic003G363200 Sobic002G219200 Sobic002G219200 Sobic004G042600--Sobic002G219200 Sobic004G042600--Sobic006G078400 Sobic003G429300 Sobic003G429300 Sobic004G042600--Sobic003G429300 Sobic006G078400--Sobic009G044400 Sobic006G078400--Sobic003G429300 Sobic006G078400--Sobic003G363200 Sobic001G290400 Sobic001G290400 Sobic006G078400--Sobic001G290400 Sobic002G118600 Sobic002G118600 Sobic006G078400--Sobic002G118600 Sobic006G078400--Sobic010G175200 Sobic001G341600 Sobic001G341600 Sobic006G078400--Sobic001G341600 Sobic001G147200 Sobic001G147200 Sobic006G078400--Sobic001G147200 Sobic006G078400--Sobic006G228300 Sobic009G044400--Sobic003G341100 Sobic009G044400--Sobic006G078400 Sobic009G217500 Sobic009G217500 Sobic009G044400--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic009G044400--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic009G044400--Sobic006G273800 Sobic009G044400--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G044400--Sobic001G035000 Sobic003G361100 Sobic003G361100 Sobic009G044400--Sobic003G361100 Sobic001G192800 Sobic001G192800 Sobic009G044400--Sobic001G192800 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic007G077100 Sobic007G077100 Sobic003G341100--Sobic007G077100 Sobic010G102000 Sobic010G102000 Sobic003G341100--Sobic010G102000 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic010G200700--Sobic004G297200 Sobic006G089300 Sobic006G089300 Sobic010G200700--Sobic006G089300 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic010G200700--Sobic009G066800 Sobic002G036100 Sobic002G036100 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic003G363200--Sobic001G290400 Sobic003G363200--Sobic004G297200 Sobic003G363200--Sobic006G078400 Sobic003G363200--Sobic010G245800 Sobic004G084100 Sobic004G084100 Sobic003G158600--Sobic004G084100 Sobic008G036000 Sobic008G036000 Sobic003G158600--Sobic008G036000 Sobic001G462800 Sobic001G462800 Sobic003G158600--Sobic001G462800 Sobic002G197600 Sobic002G197600 Sobic003G158600--Sobic002G197600 Sobic003G158600--Sobic003G268700 Sobic002G021300 Sobic002G021300 Sobic003G158600--Sobic002G021300 Sobic007G077001 Sobic007G077001 Sobic003G158600--Sobic007G077001 Sobic006G095600 Sobic006G095600 Sobic003G158600--Sobic006G095600 Sobic004G300300 Sobic004G300300 Sobic003G158600--Sobic004G300300 Sobic006G026700 Sobic006G026700 Sobic010G078600--Sobic006G026700 Sobic010G036800 Sobic010G036800 Sobic010G078600--Sobic010G036800 Sobic004G195300 Sobic004G195300 Sobic010G078600--Sobic004G195300 Sobic010G078600--Sobic006G089300 Sobic003G423500 Sobic003G423500 Sobic010G078600--Sobic003G423500 Sobic010G078600--Sobic002G036100 Sobic003G158500 Sobic003G158500 Sobic010G078600--Sobic003G158500 Sobic007G151100 Sobic007G151100 Sobic010G078600--Sobic007G151100 Sobic003G035700 Sobic003G035700 Sobic010G078600--Sobic003G035700
Octagon: transcription factors


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