Gene annotation
Transcriptome id Sobic.003G363200.2,Sobic.003G363200.1
Synonym Sb03g040490, WIP4
Functional annotation ZOS1-17 - C2H2 zinc finger protein, expressed
UniProt C5XQI1
Pfam -
Panther DB PTHR10593 PTHR10593:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20880 : WIP domain protein 4
RAP-DB (Rice) LOC_Os01g63980.1 : ZOS1-17 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a037244 , Zm00025a046409 , Zm00025a033793 , Zm00025a051571 , Zm00025a043815 , Zm00025a026771 , Zm00025a013702 , Zm00025a047434 , Zm00025a005046 , Zm00025a042128
Brachypodium KQK10684 , KQK17682 , KQJ89685 , KQK06003 , KQJ90731 , KQJ98896
Barley -
Wheat TraesCS1A02G276800 , TraesCS7B02G304000 , TraesCS7D02G242600 , TraesCS5D02G179700 , TraesCS3D02G364800 , TraesCS3B02G404000 , TraesCS5A02G263200 , TraesCS1D02G276200 , TraesCS5D02G270700 , TraesCS3A02G371700 , TraesCS7A02G404400 , TraesCS5B02G262400 , TraesCS7D02G397800 , TraesCS1B02G285900 , TraesCS7B02G147400
Populus PNT46666


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
2 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G431000 spotted leaf 11, putative, expressed -
4 Sobic.002G219200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@plant viral response family protein, putative, expressed -
5 Sobic.001G028000 expressed protein -
6 Sobic.001G290400 no apical meristem protein, putative, expressed -
7 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
9 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G042600 protein kinase domain containing protein, expressed -
11 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
12 Sobic.009G167000 expressed protein -
13 Sobic.001G189700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
14 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
15 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
16 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
17 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
19 Sobic.003G189200 expressed protein -
20 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G363200 Sobic003G363200 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic010G200700 Sobic010G200700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic001G290400 Sobic001G290400 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic006G078400 Sobic006G078400 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic005G139700--Sobic003G363200 Sobic005G139700--Sobic010G245800 Sobic005G139700--Sobic001G290400 Sobic002G197600 Sobic002G197600 Sobic005G139700--Sobic002G197600 Sobic005G139700--Sobic010G200700 Sobic005G139700--Sobic003G431000 Sobic001G051800 Sobic001G051800 Sobic005G139700--Sobic001G051800 Sobic005G139700--Sobic001G028000 Sobic001G403600 Sobic001G403600 Sobic005G139700--Sobic001G403600 Sobic010G200700--Sobic004G297200 Sobic006G089300 Sobic006G089300 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic006G228300 Sobic006G228300 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic009G066800 Sobic009G066800 Sobic010G200700--Sobic009G066800 Sobic002G036100 Sobic002G036100 Sobic010G200700--Sobic002G036100 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic003G431000--Sobic003G363200 Sobic009G167000 Sobic009G167000 Sobic003G431000--Sobic009G167000 Sobic003G431000--Sobic005G139700 Sobic003G039400 Sobic003G039400 Sobic003G431000--Sobic003G039400 Sobic003G431000--Sobic002G197600 Sobic003G431000--Sobic001G403600 Sobic002G021300 Sobic002G021300 Sobic003G431000--Sobic002G021300 Sobic004G281200 Sobic004G281200 Sobic003G431000--Sobic004G281200 Sobic008G036000 Sobic008G036000 Sobic003G431000--Sobic008G036000 Sobic009G057400 Sobic009G057400 Sobic002G219200--Sobic009G057400 Sobic002G219200--Sobic003G363200 Sobic002G219200--Sobic010G200700 Sobic001G035000 Sobic001G035000 Sobic002G219200--Sobic001G035000 Sobic004G042600 Sobic004G042600 Sobic002G219200--Sobic004G042600 Sobic006G267000 Sobic006G267000 Sobic002G219200--Sobic006G267000 Sobic006G274300 Sobic006G274300 Sobic002G219200--Sobic006G274300 Sobic003G082000 Sobic003G082000 Sobic002G219200--Sobic003G082000 Sobic002G219200--Sobic010G245800 Sobic001G028000--Sobic003G363200 Sobic001G028000--Sobic005G139700 Sobic009G030600 Sobic009G030600 Sobic001G028000--Sobic009G030600 Sobic003G268900 Sobic003G268900 Sobic001G028000--Sobic003G268900 Sobic001G028000--Sobic002G197600 Sobic003G424500 Sobic003G424500 Sobic001G028000--Sobic003G424500 Sobic001G028000--Sobic006G078400 Sobic002G217100 Sobic002G217100 Sobic001G028000--Sobic002G217100 Sobic009G044400 Sobic009G044400 Sobic001G028000--Sobic009G044400 Sobic002G118600 Sobic002G118600 Sobic001G290400--Sobic002G118600 Sobic002G294700 Sobic002G294700 Sobic001G290400--Sobic002G294700 Sobic001G290400--Sobic001G051800 Sobic004G053200 Sobic004G053200 Sobic001G290400--Sobic004G053200 Sobic003G338900 Sobic003G338900 Sobic001G290400--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic001G290400--Sobic001G473900 Sobic010G228000 Sobic010G228000 Sobic001G290400--Sobic010G228000 Sobic001G290400--Sobic005G139700 Sobic001G538866 Sobic001G538866 Sobic001G290400--Sobic001G538866 Sobic004G297200--Sobic010G200700 Sobic010G175200 Sobic010G175200 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic004G297200--Sobic003G012800 Sobic004G297200--Sobic003G363200 Sobic004G297200--Sobic009G066800 Sobic004G297200--Sobic009G044400 Sobic006G078400--Sobic009G044400 Sobic003G429300 Sobic003G429300 Sobic006G078400--Sobic003G429300 Sobic006G078400--Sobic003G363200 Sobic006G078400--Sobic001G290400 Sobic006G078400--Sobic002G118600 Sobic006G078400--Sobic010G175200 Sobic001G341600 Sobic001G341600 Sobic006G078400--Sobic001G341600 Sobic001G147200 Sobic001G147200 Sobic006G078400--Sobic001G147200 Sobic006G078400--Sobic006G228300 Sobic010G246000 Sobic010G246000 Sobic010G245800--Sobic010G246000 Sobic010G245800--Sobic010G200700 Sobic010G245800--Sobic005G139700 Sobic009G071800 Sobic009G071800 Sobic010G245800--Sobic009G071800 Sobic010G245800--Sobic002G294700 Sobic010G234600 Sobic010G234600 Sobic010G245800--Sobic010G234600 Sobic010G245800--Sobic001G051800 Sobic003G019200 Sobic003G019200 Sobic010G245800--Sobic003G019200 Sobic002G248100 Sobic002G248100 Sobic010G245800--Sobic002G248100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.