Gene annotation
Transcriptome id Sobic.001G028000.1
Synonym Sb01g002650
Functional annotation expressed protein
UniProt A0A1B6QH24
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g61240.1 : expressed protein
MaizeGDB (Corn) Zm00025a008889
Brachypodium KQK12357 , KQK12358
Barley HORVU5Hr1G115410.1 , HORVU5Hr1G115450.1 , HORVU5Hr1G115350.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
2 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
3 Sobic.009G030600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
7 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
8 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
9 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
10 Sobic.009G167000 expressed protein -
11 Sobic.006G274300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
13 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
14 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
15 Sobic.006G208100 maintain optimal Na+/K+ (PubmedID : 24325391)@Up-reguralion under drought(PubMedID : 24916767)@OsHKT1@4 - Na+ transporter, expressed -
16 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
17 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.003G338900 expressed protein -
19 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G028000 Sobic001G028000 Sobic003G363200 Sobic003G363200 Sobic001G028000--Sobic003G363200 Sobic005G139700 Sobic005G139700 Sobic001G028000--Sobic005G139700 Sobic009G030600 Sobic009G030600 Sobic001G028000--Sobic009G030600 Sobic003G268900 Sobic003G268900 Sobic001G028000--Sobic003G268900 Sobic002G197600 Sobic002G197600 Sobic001G028000--Sobic002G197600 Sobic003G424500 Sobic003G424500 Sobic001G028000--Sobic003G424500 Sobic006G078400 Sobic006G078400 Sobic001G028000--Sobic006G078400 Sobic002G217100 Sobic002G217100 Sobic001G028000--Sobic002G217100 Sobic009G044400 Sobic009G044400 Sobic001G028000--Sobic009G044400 Sobic003G363200--Sobic005G139700 Sobic010G200700 Sobic010G200700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic003G363200--Sobic001G028000 Sobic001G290400 Sobic001G290400 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic005G139700--Sobic003G363200 Sobic005G139700--Sobic010G245800 Sobic005G139700--Sobic001G290400 Sobic005G139700--Sobic002G197600 Sobic005G139700--Sobic010G200700 Sobic005G139700--Sobic003G431000 Sobic001G051800 Sobic001G051800 Sobic005G139700--Sobic001G051800 Sobic005G139700--Sobic001G028000 Sobic001G403600 Sobic001G403600 Sobic005G139700--Sobic001G403600 Sobic009G030600--Sobic003G424500 Sobic008G059000 Sobic008G059000 Sobic009G030600--Sobic008G059000 Sobic009G167000 Sobic009G167000 Sobic009G030600--Sobic009G167000 Sobic004G281200 Sobic004G281200 Sobic009G030600--Sobic004G281200 Sobic009G030600--Sobic002G217100 Sobic001G050800 Sobic001G050800 Sobic009G030600--Sobic001G050800 Sobic004G053200 Sobic004G053200 Sobic009G030600--Sobic004G053200 Sobic009G030600--Sobic001G051800 Sobic006G194600 Sobic006G194600 Sobic009G030600--Sobic006G194600 Sobic004G244100 Sobic004G244100 Sobic003G268900--Sobic004G244100 Sobic001G095700 Sobic001G095700 Sobic003G268900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic003G268900--Sobic002G367900 Sobic003G268900--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic003G268900--Sobic006G210300 Sobic003G268900--Sobic002G197600 Sobic004G244300 Sobic004G244300 Sobic003G268900--Sobic004G244300 Sobic003G268900--Sobic009G167000 Sobic003G268900--Sobic004G281200 Sobic001G081600 Sobic001G081600 Sobic002G197600--Sobic001G081600 Sobic002G197600--Sobic002G217100 Sobic001G462800 Sobic001G462800 Sobic002G197600--Sobic001G462800 Sobic002G197600--Sobic004G281200 Sobic002G197600--Sobic006G210300 Sobic002G197600--Sobic002G367900 Sobic008G036000 Sobic008G036000 Sobic002G197600--Sobic008G036000 Sobic002G197600--Sobic004G244100 Sobic004G176900 Sobic004G176900 Sobic002G197600--Sobic004G176900 Sobic003G146000 Sobic003G146000 Sobic003G424500--Sobic003G146000 Sobic004G300300 Sobic004G300300 Sobic003G424500--Sobic004G300300 Sobic010G247500 Sobic010G247500 Sobic003G424500--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic003G424500--Sobic009G030600 Sobic003G087100 Sobic003G087100 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic003G424500--Sobic009G076500 Sobic006G078400--Sobic009G044400 Sobic003G429300 Sobic003G429300 Sobic006G078400--Sobic003G429300 Sobic006G078400--Sobic003G363200 Sobic006G078400--Sobic001G290400 Sobic002G118600 Sobic002G118600 Sobic006G078400--Sobic002G118600 Sobic010G175200 Sobic010G175200 Sobic006G078400--Sobic010G175200 Sobic001G341600 Sobic001G341600 Sobic006G078400--Sobic001G341600 Sobic001G147200 Sobic001G147200 Sobic006G078400--Sobic001G147200 Sobic006G228300 Sobic006G228300 Sobic006G078400--Sobic006G228300 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G217100--Sobic002G197600 Sobic010G016500 Sobic010G016500 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic002G217100--Sobic009G167000 Sobic002G217100--Sobic004G244100 Sobic003G341100 Sobic003G341100 Sobic009G044400--Sobic003G341100 Sobic009G044400--Sobic006G078400 Sobic009G217500 Sobic009G217500 Sobic009G044400--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic009G044400--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic009G044400--Sobic006G273800 Sobic009G044400--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G044400--Sobic001G035000 Sobic003G361100 Sobic003G361100 Sobic009G044400--Sobic003G361100 Sobic001G192800 Sobic001G192800 Sobic009G044400--Sobic001G192800
Octagon: transcription factors


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