Gene annotation
Transcriptome id Sobic.009G030600.1
Synonym Sb09g002550, CRK2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5YZG6
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF46
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G70520 : cysteine-rich RLK (RECEPTOR-like protein kinase) 2
RAP-DB (Rice) LOC_Os05g03920.1 : TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a038163 , Zm00025a043602
Brachypodium KQK07919 , PNT72014
Barley HORVU1Hr1G015770.3 , HORVU1Hr1G015770.2 , HORVU1Hr1G015770.1 , HORVU1Hr1G015770.6 , HORVU1Hr1G015770.5 , HORVU1Hr1G015770.4 , HORVU4Hr1G019460.1
Wheat TraesCS1D02G076200 , TraesCS1B02G091900 , TraesCS1A02G073300 , TraesCS1A02G073300 , TraesCS1B02G283400 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
2 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.009G167000 expressed protein -
4 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
5 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
7 Sobic.004G053200 Cupin domain containing protein, expressed -
8 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
9 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
10 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
11 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
13 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G028000 expressed protein -
16 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
17 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.001G189700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
19 Sobic.003G338900 expressed protein -
20 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2


Gene co-expression network
sample Sobic009G030600 Sobic009G030600 Sobic003G424500 Sobic003G424500 Sobic009G030600--Sobic003G424500 Sobic008G059000 Sobic008G059000 Sobic009G030600--Sobic008G059000 Sobic009G167000 Sobic009G167000 Sobic009G030600--Sobic009G167000 Sobic004G281200 Sobic004G281200 Sobic009G030600--Sobic004G281200 Sobic002G217100 Sobic002G217100 Sobic009G030600--Sobic002G217100 Sobic001G050800 Sobic001G050800 Sobic009G030600--Sobic001G050800 Sobic004G053200 Sobic004G053200 Sobic009G030600--Sobic004G053200 Sobic001G051800 Sobic001G051800 Sobic009G030600--Sobic001G051800 Sobic006G194600 Sobic006G194600 Sobic009G030600--Sobic006G194600 Sobic003G146000 Sobic003G146000 Sobic003G424500--Sobic003G146000 Sobic004G300300 Sobic004G300300 Sobic003G424500--Sobic004G300300 Sobic010G247500 Sobic010G247500 Sobic003G424500--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic003G424500--Sobic009G030600 Sobic003G087100 Sobic003G087100 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic003G424500--Sobic009G076500 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic002G021300 Sobic002G021300 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic009G167000--Sobic002G021300 Sobic004G244300 Sobic004G244300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G167000--Sobic009G076500 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic006G203000 Sobic006G203000 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic004G281200--Sobic006G210300 Sobic001G081600 Sobic001G081600 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic001G462800 Sobic001G462800 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G197600 Sobic002G197600 Sobic002G217100--Sobic002G197600 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic002G217100--Sobic009G167000 Sobic002G217100--Sobic004G244100 Sobic001G157400 Sobic001G157400 Sobic001G050800--Sobic001G157400 Sobic009G170100 Sobic009G170100 Sobic001G050800--Sobic009G170100 Sobic001G050800--Sobic006G194600 Sobic006G026400 Sobic006G026400 Sobic001G050800--Sobic006G026400 Sobic006G032200 Sobic006G032200 Sobic001G050800--Sobic006G032200 Sobic001G050800--Sobic004G281200 Sobic001G050800--Sobic004G244300 Sobic001G050800--Sobic004G244100 Sobic002G068800 Sobic002G068800 Sobic001G050800--Sobic002G068800 Sobic001G189700 Sobic001G189700 Sobic004G053200--Sobic001G189700 Sobic001G290400 Sobic001G290400 Sobic004G053200--Sobic001G290400 Sobic004G280800 Sobic004G280800 Sobic004G053200--Sobic004G280800 Sobic003G338900 Sobic003G338900 Sobic004G053200--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic004G053200--Sobic001G473900 Sobic004G025000 Sobic004G025000 Sobic004G053200--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic004G053200--Sobic001G476400 Sobic004G053200--Sobic001G081600 Sobic006G095600 Sobic006G095600 Sobic004G053200--Sobic006G095600 Sobic009G220200 Sobic009G220200 Sobic001G051800--Sobic009G220200 Sobic001G051800--Sobic001G290400 Sobic001G051800--Sobic003G338900 Sobic009G071800 Sobic009G071800 Sobic001G051800--Sobic009G071800 Sobic002G203000 Sobic002G203000 Sobic001G051800--Sobic002G203000 Sobic003G296700 Sobic003G296700 Sobic001G051800--Sobic003G296700 Sobic009G208800 Sobic009G208800 Sobic001G051800--Sobic009G208800 Sobic002G294700 Sobic002G294700 Sobic001G051800--Sobic002G294700 Sobic001G051800--Sobic001G473900 Sobic006G194600--Sobic004G244300 Sobic006G194600--Sobic006G026400 Sobic006G194600--Sobic004G244100 Sobic006G194600--Sobic010G016500 Sobic006G194600--Sobic004G281200 Sobic006G194600--Sobic006G203000 Sobic006G194600--Sobic009G167000 Sobic002G037400 Sobic002G037400 Sobic006G194600--Sobic002G037400 Sobic006G194600--Sobic008G059000
Octagon: transcription factors


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