Gene annotation
| Transcriptome id | Sobic.006G208100.2 |
|---|---|
| Synonym | high‐affinity potassium transporter, SbHKT1;4;high‐affinity potassium transporter, HKT1, SbHKT1;4, ATHKT1, Sb06g027900 |
| Functional annotation | maintain optimal Na+/K+ (PubmedID : 24325391) Up-reguralion under drought (PubMedID : 24916767) OsHKT1 4 - Na+ transporter, expressed |
| UniProt | A0A1Z5REV6 |
| Pfam | PF02386 |
| Panther DB | PTHR31064 PTHR31064:SF7 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0008324; cation transmembrane transporter activity GO:0006812cation transport |
Orthologs (automatic annotation)
| TAIR | AT4G10310 : high-affinity K+ transporter 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g51830.1 : OsHKT1;4 - Na+ transporter, expressed |
| MaizeGDB (Corn) | Zm00025a009862 |
| Brachypodium | KQJ84462 |
| Barley | HORVU2Hr1G100450.2 , HORVU2Hr1G100450.3 , HORVU2Hr1G100450.4 , HORVU2Hr1G100450.5 , HORVU2Hr1G100420.2 |
| Wheat | TraesCS2A02G430600 , TraesCS2D02G428400 , TraesCS2D02G428200 , TraesCS2B02G451300 , TraesCS2B02G451400 , TraesCS2B02G451800 , TraesCS2B02G451600 , TraesCS2D02G428300 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G012800 | oxidoreductase, aldo/keto reductase family protein, putative, expressed | - |
| 2 | Sobic.010G201200 | expressed protein | - |
| 3 | Sobic.010G253500 | cycloartenol synthase, putative, expressed | K19011: achilleol B synthase |
| 4 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 5 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 6 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 7 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 8 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 9 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 10 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 11 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 12 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 13 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 14 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 15 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 16 | Sobic.008G058900 | amino acid transporter, putative, expressed | - |
| 17 | Sobic.003G348700 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 18 | Sobic.001G164100 | cytochrome P450, putative, expressed | - |
| 19 | Sobic.002G188700 | armadillo/beta-catenin repeat family protein, putative, expressed | - |
| 20 | Sobic.009G057400 | cytochrome c oxidase-related, putative, expressed | K02266: cytochrome c oxidase subunit 6a |
Gene co-expression network
Octagon: transcription factors
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