Gene annotation
| Transcriptome id | Sobic.001G164100.2,Sobic.001G164100.3,Sobic.001G164100.1 |
|---|---|
| Synonym | Sb01g014340, CYP87A2 |
| Functional annotation | cytochrome P450, putative, expressed |
| UniProt | C5WS77 , A0A1Z5S5W8 , A0A1Z5S6A4 |
| Pfam | PF00067 |
| Panther DB | PTHR24286 PTHR24286:SF81 |
| NCBI CDD | KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT1G12740 : cytochrome P450, family 87, subfamily A, polypeptide 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g45619.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a017198 , Zm00025a017295 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 2 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 3 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 4 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 5 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 6 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 7 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 8 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 9 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 10 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 11 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 12 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 13 | Sobic.010G253500 | cycloartenol synthase, putative, expressed | K19011: achilleol B synthase |
| 14 | Sobic.001G210250 | - | - |
| 15 | Sobic.006G272700 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 16 | Sobic.005G158000 | cytochrome P450 71E1, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 17 | Sobic.007G073750 | - | - |
| 18 | Sobic.001G027800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed | K19355: mannan endo-1,4-beta-mannosidase |
| 19 | Sobic.010G017501 | - | - |
| 20 | Sobic.003G397400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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