Gene annotation
| Transcriptome id | Sobic.006G272700.1 |
|---|---|
| Synonym | Sb06g033420 |
| Functional annotation | Up-reguralion under drought (PubMedID : 24916767) expressed protein |
| UniProt | C5YAP0 |
| Pfam | - |
| Panther DB | PTHR23155 PTHR23155:SF509 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os10g04380.1 : expressed protein |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G027800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed | K19355: mannan endo-1,4-beta-mannosidase |
| 2 | Sobic.010G253500 | cycloartenol synthase, putative, expressed | K19011: achilleol B synthase |
| 3 | Sobic.001G210250 | - | - |
| 4 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 5 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 6 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 7 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 8 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 9 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 10 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 11 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 12 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 13 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 14 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 15 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 16 | Sobic.001G164100 | cytochrome P450, putative, expressed | - |
| 17 | Sobic.007G073750 | - | - |
| 18 | Sobic.003G397400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 19 | Sobic.009G076700 | expressed protein | - |
| 20 | Sobic.005G016900 | CRP11 - Cysteine-rich family protein precursor, expressed | - |
Gene co-expression network
Octagon: transcription factors
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