Gene annotation
| Transcriptome id | Sobic.001G210250.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5S6Y8 |
| Pfam | - |
| Panther DB | PTHR33191 PTHR33191:SF2 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os02g42450.1 : RIPER1 - Ripening-related family protein precursor, expressed |
| MaizeGDB (Corn) | Zm00025a009514 , Zm00025a057224 , Zm00025a009513 |
| Brachypodium | KQJ97248 , KQK21890 , KQJ97233 , KQK13134 |
| Barley | HORVU6Hr1G003460.2 , HORVU6Hr1G003460.1 , HORVU6Hr1G003410.2 , HORVU6Hr1G003410.1 , HORVU1Hr1G044040.1 |
| Wheat | TraesCS6A02G018800 , TraesCS6A02G332900 , TraesCS1B02G183900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G253500 | cycloartenol synthase, putative, expressed | K19011: achilleol B synthase |
| 2 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 3 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 4 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 5 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 6 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 7 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 8 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 9 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 10 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 11 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 12 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 13 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 14 | Sobic.001G164100 | cytochrome P450, putative, expressed | - |
| 15 | Sobic.007G073750 | - | - |
| 16 | Sobic.006G272700 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 17 | Sobic.009G076700 | expressed protein | - |
| 18 | Sobic.001G027800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed | K19355: mannan endo-1,4-beta-mannosidase |
| 19 | Sobic.003G397400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 20 | Sobic.007G143200 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
Gene co-expression network
Octagon: transcription factors
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