Gene annotation
| Transcriptome id | Sobic.002G012800.1 |
|---|---|
| Synonym | Sb02g001350 |
| Functional annotation | oxidoreductase, aldo/keto reductase family protein, putative, expressed |
| UniProt | C5X7X3 |
| Pfam | PF00248 |
| Panther DB | PTHR11732 PTHR11732:SF12 |
| NCBI CDD | KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G60680 : NAD(P)-linked oxidoreductase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g27060.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a005311 , Zm00025a041363 , Zm00025a014620 , Zm00025a038451 , Zm00025a038544 |
| Brachypodium | KQK07543 , KQK00248 |
| Barley | HORVU6Hr1G026770.1 , HORVU3Hr1G054640.4 , HORVU3Hr1G054640.5 , HORVU3Hr1G054640.2 , HORVU3Hr1G054640.3 , HORVU3Hr1G054640.1 , HORVU2Hr1G082700.5 , HORVU2Hr1G082700.4 , HORVU2Hr1G082700.6 , HORVU2Hr1G082700.1 , HORVU2Hr1G082700.3 , HORVU2Hr1G082700.2 , HORVU2Hr1G082740.1 , HORVU2Hr1G082740.3 , HORVU2Hr1G082740.2 , HORVU2Hr1G082740.5 , HORVU2Hr1G082740.4 , HORVU2Hr1G082740.7 , HORVU2Hr1G082740.6 |
| Wheat | TraesCS5D02G336900 , TraesCS2D02G336900 , TraesCS2B02G356100 , TraesCS3A02G222900 , TraesCS2D02G336700 , TraesCS3B02G252400 , TraesCS2A02G326100 , TraesCS3D02G230600 , TraesCS2D02G336800 , TraesCS2B02G355900 , TraesCS2A02G325800 , TraesCS2A02G325800 , TraesCS6D02G127900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G348700 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 2 | Sobic.006G208100 | maintain optimal Na+/K+ (PubmedID : 24325391)@Up-reguralion under drought(PubMedID : 24916767)@OsHKT1@4 - Na+ transporter, expressed | - |
| 3 | Sobic.010G201200 | expressed protein | - |
| 4 | Sobic.001G027800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed | K19355: mannan endo-1,4-beta-mannosidase |
| 5 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 6 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 7 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 8 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 9 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 10 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 11 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 12 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 13 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 14 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 15 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 16 | Sobic.001G210200 | RIPER9 - Ripening-related family protein precursor, putative, expressed | - |
| 17 | Sobic.003G363200 | ZOS1-17 - C2H2 zinc finger protein, expressed | - |
| 18 | Sobic.005G215766 | - | - |
| 19 | Sobic.010G105500 | - | - |
| 20 | Sobic.002G188700 | armadillo/beta-catenin repeat family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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