Gene annotation
Transcriptome id Sobic.010G105500.1
Synonym
Functional annotation -
UniProt A0A194YIC7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a050380
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G247500 homeobox associated leucine zipper, putative, expressed -
2 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
3 Sobic.009G076500 expressed protein -
4 Sobic.010G238400 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
5 Sobic.009G167000 expressed protein -
6 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
7 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
8 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
9 Sobic.010G201200 expressed protein -
10 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
11 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
12 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
13 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
14 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
15 Sobic.006G026400 - -
16 Sobic.008G058900 amino acid transporter, putative, expressed -
17 Sobic.009G076700 expressed protein -
18 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
20 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -


Gene co-expression network
sample Sobic010G105500 Sobic010G105500 Sobic010G247500 Sobic010G247500 Sobic010G105500--Sobic010G247500 Sobic003G424500 Sobic003G424500 Sobic010G105500--Sobic003G424500 Sobic009G076500 Sobic009G076500 Sobic010G105500--Sobic009G076500 Sobic010G238400 Sobic010G238400 Sobic010G105500--Sobic010G238400 Sobic009G167000 Sobic009G167000 Sobic010G105500--Sobic009G167000 Sobic002G021300 Sobic002G021300 Sobic010G105500--Sobic002G021300 Sobic003G146000 Sobic003G146000 Sobic010G105500--Sobic003G146000 Sobic006G203000 Sobic006G203000 Sobic010G105500--Sobic006G203000 Sobic010G201200 Sobic010G201200 Sobic010G105500--Sobic010G201200 Sobic010G247500--Sobic010G105500 Sobic010G247500--Sobic010G238400 Sobic010G247500--Sobic006G203000 Sobic010G247500--Sobic003G424500 Sobic010G247500--Sobic003G146000 Sobic002G037400 Sobic002G037400 Sobic010G247500--Sobic002G037400 Sobic006G026400 Sobic006G026400 Sobic010G247500--Sobic006G026400 Sobic004G281200 Sobic004G281200 Sobic010G247500--Sobic004G281200 Sobic003G087100 Sobic003G087100 Sobic010G247500--Sobic003G087100 Sobic003G424500--Sobic003G146000 Sobic004G300300 Sobic004G300300 Sobic003G424500--Sobic004G300300 Sobic003G424500--Sobic010G247500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic003G424500--Sobic009G030600 Sobic003G424500--Sobic003G087100 Sobic008G059000 Sobic008G059000 Sobic003G424500--Sobic008G059000 Sobic003G424500--Sobic009G076500 Sobic009G076500--Sobic002G021300 Sobic009G076700 Sobic009G076700 Sobic009G076500--Sobic009G076700 Sobic009G076500--Sobic002G037400 Sobic009G076500--Sobic006G026400 Sobic009G076500--Sobic006G203000 Sobic009G076500--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic009G076500--Sobic004G244100 Sobic009G076500--Sobic008G059000 Sobic006G194600 Sobic006G194600 Sobic009G076500--Sobic006G194600 Sobic010G238400--Sobic006G203000 Sobic003G397400 Sobic003G397400 Sobic010G238400--Sobic003G397400 Sobic010G238400--Sobic010G247500 Sobic010G238400--Sobic003G146000 Sobic010G238400--Sobic002G037400 Sobic010G238400--Sobic009G076700 Sobic007G073750 Sobic007G073750 Sobic010G238400--Sobic007G073750 Sobic007G143100 Sobic007G143100 Sobic010G238400--Sobic007G143100 Sobic007G169600 Sobic007G169600 Sobic010G238400--Sobic007G169600 Sobic009G167000--Sobic002G021300 Sobic004G244300 Sobic004G244300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic002G217100 Sobic002G217100 Sobic009G167000--Sobic002G217100 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic002G021300--Sobic009G167000 Sobic002G021300--Sobic004G300300 Sobic002G021300--Sobic004G281200 Sobic002G021300--Sobic009G076500 Sobic002G021300--Sobic008G059000 Sobic002G021300--Sobic002G037400 Sobic002G021300--Sobic006G026400 Sobic002G021300--Sobic006G194600 Sobic002G021300--Sobic004G244100 Sobic003G146000--Sobic003G424500 Sobic003G146000--Sobic010G238400 Sobic003G146000--Sobic010G247500 Sobic003G146000--Sobic010G105500 Sobic003G348700 Sobic003G348700 Sobic003G146000--Sobic003G348700 Sobic009G068900 Sobic009G068900 Sobic003G146000--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic003G146000--Sobic004G176900 Sobic009G212800 Sobic009G212800 Sobic003G146000--Sobic009G212800 Sobic003G146000--Sobic004G300300 Sobic006G203000--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic006G203000--Sobic001G075101 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic002G110200 Sobic002G110200 Sobic006G203000--Sobic002G110200 Sobic010G201200--Sobic008G058900 Sobic010G201200--Sobic009G068900 Sobic010G201200--Sobic009G076700 Sobic010G201200--Sobic009G076500 Sobic010G201200--Sobic007G073750 Sobic010G253500 Sobic010G253500 Sobic010G201200--Sobic010G253500 Sobic010G201200--Sobic010G238400 Sobic010G201200--Sobic009G167000 Sobic010G201200--Sobic003G397400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.