Gene annotation
Transcriptome id Sobic.003G146000.1,Sobic.003G146000.2
Synonym Sb03g012610
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
methyltransferase, putative, expressed
UniProt A0A1W0VXE6
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF692
NCBI CDD KOG3010; Methyltransferase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G41380 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g20206.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a036069
Brachypodium KQK04109 , KQK04108
Barley HORVU2Hr1G007570.1 , HORVU2Hr1G007570.3 , HORVU2Hr1G007570.2 , HORVU2Hr1G007570.5 , HORVU2Hr1G007570.4
Wheat TraesCS2B02G062500 , TraesCS2A02G048600 , TraesCS2D02G047500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
2 Sobic.010G238400 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
3 Sobic.010G247500 homeobox associated leucine zipper, putative, expressed -
4 Sobic.010G105500 - -
5 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.009G068900 WRKY67, expressed -
7 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
8 Sobic.009G212800 WRKY7, expressed -
9 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
10 Sobic.002G135800 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
11 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.008G058900 amino acid transporter, putative, expressed -
13 Sobic.010G201200 expressed protein -
14 Sobic.009G142200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
15 Sobic.009G167000 expressed protein -
16 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
17 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
18 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G146000 Sobic003G146000 Sobic003G424500 Sobic003G424500 Sobic003G146000--Sobic003G424500 Sobic010G238400 Sobic010G238400 Sobic003G146000--Sobic010G238400 Sobic010G247500 Sobic010G247500 Sobic003G146000--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G146000--Sobic010G105500 Sobic003G348700 Sobic003G348700 Sobic003G146000--Sobic003G348700 Sobic009G068900 Sobic009G068900 Sobic003G146000--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic003G146000--Sobic004G176900 Sobic009G212800 Sobic009G212800 Sobic003G146000--Sobic009G212800 Sobic004G300300 Sobic004G300300 Sobic003G146000--Sobic004G300300 Sobic003G424500--Sobic003G146000 Sobic003G424500--Sobic004G300300 Sobic003G424500--Sobic010G247500 Sobic003G424500--Sobic010G105500 Sobic009G167000 Sobic009G167000 Sobic003G424500--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic003G424500--Sobic009G030600 Sobic003G087100 Sobic003G087100 Sobic003G424500--Sobic003G087100 Sobic008G059000 Sobic008G059000 Sobic003G424500--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic003G424500--Sobic009G076500 Sobic006G203000 Sobic006G203000 Sobic010G238400--Sobic006G203000 Sobic003G397400 Sobic003G397400 Sobic010G238400--Sobic003G397400 Sobic010G238400--Sobic010G247500 Sobic010G238400--Sobic003G146000 Sobic002G037400 Sobic002G037400 Sobic010G238400--Sobic002G037400 Sobic009G076700 Sobic009G076700 Sobic010G238400--Sobic009G076700 Sobic007G073750 Sobic007G073750 Sobic010G238400--Sobic007G073750 Sobic007G143100 Sobic007G143100 Sobic010G238400--Sobic007G143100 Sobic007G169600 Sobic007G169600 Sobic010G238400--Sobic007G169600 Sobic010G247500--Sobic010G105500 Sobic010G247500--Sobic010G238400 Sobic010G247500--Sobic006G203000 Sobic010G247500--Sobic003G424500 Sobic010G247500--Sobic003G146000 Sobic010G247500--Sobic002G037400 Sobic006G026400 Sobic006G026400 Sobic010G247500--Sobic006G026400 Sobic004G281200 Sobic004G281200 Sobic010G247500--Sobic004G281200 Sobic010G247500--Sobic003G087100 Sobic010G105500--Sobic010G247500 Sobic010G105500--Sobic003G424500 Sobic010G105500--Sobic009G076500 Sobic010G105500--Sobic010G238400 Sobic010G105500--Sobic009G167000 Sobic002G021300 Sobic002G021300 Sobic010G105500--Sobic002G021300 Sobic010G105500--Sobic003G146000 Sobic010G105500--Sobic006G203000 Sobic010G201200 Sobic010G201200 Sobic010G105500--Sobic010G201200 Sobic002G012800 Sobic002G012800 Sobic003G348700--Sobic002G012800 Sobic003G348700--Sobic003G146000 Sobic006G208100 Sobic006G208100 Sobic003G348700--Sobic006G208100 Sobic009G142200 Sobic009G142200 Sobic003G348700--Sobic009G142200 Sobic008G058900 Sobic008G058900 Sobic003G348700--Sobic008G058900 Sobic002G135800 Sobic002G135800 Sobic003G348700--Sobic002G135800 Sobic003G363200 Sobic003G363200 Sobic003G348700--Sobic003G363200 Sobic002G188700 Sobic002G188700 Sobic003G348700--Sobic002G188700 Sobic010G182966 Sobic010G182966 Sobic003G348700--Sobic010G182966 Sobic009G068900--Sobic009G212800 Sobic009G068900--Sobic004G176900 Sobic009G068900--Sobic007G073750 Sobic009G068900--Sobic009G076700 Sobic010G253500 Sobic010G253500 Sobic009G068900--Sobic010G253500 Sobic009G068900--Sobic003G397400 Sobic005G016900 Sobic005G016900 Sobic009G068900--Sobic005G016900 Sobic009G068900--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic009G068900--Sobic007G143200 Sobic004G176900--Sobic009G068900 Sobic004G244100 Sobic004G244100 Sobic004G176900--Sobic004G244100 Sobic002G197600 Sobic002G197600 Sobic004G176900--Sobic002G197600 Sobic004G176900--Sobic009G167000 Sobic004G176900--Sobic009G212800 Sobic004G176900--Sobic006G203000 Sobic004G176900--Sobic002G037400 Sobic004G176900--Sobic008G058900 Sobic002G367900 Sobic002G367900 Sobic004G176900--Sobic002G367900 Sobic009G212800--Sobic009G068900 Sobic009G212800--Sobic004G176900 Sobic009G212800--Sobic002G367900 Sobic009G212800--Sobic003G146000 Sobic003G291600 Sobic003G291600 Sobic009G212800--Sobic003G291600 Sobic009G212800--Sobic004G244100 Sobic009G212800--Sobic006G203000 Sobic009G064400 Sobic009G064400 Sobic009G212800--Sobic009G064400 Sobic003G268900 Sobic003G268900 Sobic009G212800--Sobic003G268900 Sobic004G300300--Sobic002G021300 Sobic004G300300--Sobic003G424500 Sobic004G300300--Sobic009G167000 Sobic004G300300--Sobic002G135800 Sobic004G300300--Sobic002G188700 Sobic007G101800 Sobic007G101800 Sobic004G300300--Sobic007G101800 Sobic004G300300--Sobic003G087100 Sobic004G300300--Sobic008G059000 Sobic004G300300--Sobic009G076500
Octagon: transcription factors


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