Gene annotation
Transcriptome id Sobic.009G142200.2,Sobic.009G142200.3,Sobic.009G142200.1
Synonym ATAF1, Sb09g020750, ANAC002
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
No apical meristem protein, putative, expressed
UniProt C5YY67 , A0A1B6P8Z9 , A0A1Z5R3L0
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF21 PTHR31719 PTHR31719:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G01720 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os05g34830.3,LOC_Os05g34830.1 : No apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a043734 , Zm00025a049186 , Zm00025a016464 , Zm00025a016671 , Zm00025a008395 , Zm00025a040616 , Zm00025a008743 , Zm00025a025343 , Zm00025a056131 , Zm00025a034042 , Zm00025a026546 , Zm00025a047596 , Zm00025a009747 , Zm00025a039792
Brachypodium KQK12943 , KQJ85858 , KQK19730 , KQK20318 , KQK06182 , KQK10307 , KQJ84638 , KQK10926 , KQJ97887 , PNT71229 , KQJ87582 , KQJ82828 , PNT76596 , KQK20999
Barley HORVU4Hr1G017430.7 , HORVU4Hr1G017430.6 , HORVU4Hr1G017430.5 , HORVU4Hr1G017430.4 , HORVU4Hr1G017430.3 , HORVU4Hr1G017430.2 , HORVU4Hr1G017430.1 , HORVU4Hr1G017430.9 , HORVU4Hr1G017430.8 , HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU6Hr1G015950.1 , HORVU3Hr1G094170.1 , HORVU7Hr1G012760.10 , HORVU4Hr1G017430.11 , HORVU4Hr1G017430.10 , HORVU7Hr1G012740.1 , HORVU1Hr1G063740.3 , HORVU1Hr1G063740.2 , HORVU1Hr1G063740.1 , HORVU1Hr1G063740.7 , HORVU1Hr1G063740.6 , HORVU1Hr1G063740.5 , HORVU1Hr1G063740.4 , HORVU1Hr1G063740.9 , HORVU1Hr1G063740.8 , HORVU5Hr1G111590.4 , HORVU5Hr1G111590.5 , HORVU5Hr1G111590.6 , HORVU5Hr1G111590.1 , HORVU5Hr1G111590.2 , HORVU5Hr1G111590.3 , HORVU2Hr1G017460.10 , HORVU1Hr1G063730.1 , HORVU7Hr1G012760.3 , HORVU7Hr1G012760.2 , HORVU7Hr1G012760.1 , HORVU7Hr1G012760.6 , HORVU7Hr1G012760.5 , HORVU7Hr1G012760.4 , HORVU7Hr1G012760.7 , HORVU7Hr1G012760.9 , HORVU7Hr1G012760.8 , HORVU2Hr1G103930.2 , HORVU2Hr1G103930.3 , HORVU2Hr1G103930.1 , HORVU2Hr1G103930.6 , HORVU2Hr1G103930.7 , HORVU2Hr1G103930.4 , HORVU2Hr1G103930.5 , HORVU2Hr1G103930.8 , HORVU2Hr1G103930.9 , HORVU0Hr1G028970.1 , HORVU6Hr1G019380.5 , HORVU6Hr1G019380.4 , HORVU6Hr1G019380.3 , HORVU6Hr1G019380.2 , HORVU0Hr1G026330.4 , HORVU0Hr1G026330.5 , HORVU0Hr1G026330.1 , HORVU0Hr1G026330.2 , HORVU1Hr1G063740.10 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12 , HORVU2Hr1G017460.8 , HORVU2Hr1G017460.9 , HORVU2Hr1G017460.2 , HORVU2Hr1G017460.3 , HORVU2Hr1G017460.6 , HORVU2Hr1G017460.7 , HORVU2Hr1G017460.4 , HORVU2Hr1G017460.5 , HORVU5Hr1G111590.7
Wheat TraesCS5A02G049100 , TraesCS5A02G049100 , TraesCS1D02G263800 , TraesCS3B02G439600 , TraesCS7D02G063300 , TraesCS4A02G421200 , TraesCS2A02G462500 , TraesCS3D02G401200 , TraesCS4A02G420200 , TraesCS2A02G101900 , TraesCS2B02G119100 , TraesCS3A02G406000 , TraesCS7D02G062600 , TraesCS2D02G101400 , TraesCS2A02G102000 , TraesCS1B02G274300 , TraesCS2D02G462900 , TraesCS4A02G219700 , TraesCS5B02G054200 , TraesCS5B02G054200 , TraesCS5D02G059700 , TraesCS5D02G059700 , TraesCS4B02G098200 , TraesCS1A02G263700 , TraesCS4D02G094400
Populus -


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cDNA sequences
Sobic.009G142200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
3 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
4 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
5 Sobic.002G379866 - -
6 Sobic.010G182966 - K15639: CYP734A1, PHYB activation tagged suppressor 1
7 Sobic.004G236550 - -
8 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
9 Sobic.001G028000 expressed protein -
10 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
11 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
12 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
13 Sobic.008G058900 amino acid transporter, putative, expressed -
14 Sobic.010G238400 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
15 Sobic.003G146100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
16 Sobic.002G012800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
18 Sobic.004G267500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
19 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
20 Sobic.005G215766 - -


Gene co-expression network
sample Sobic009G142200 Sobic009G142200 Sobic003G348700 Sobic003G348700 Sobic009G142200--Sobic003G348700 Sobic003G146000 Sobic003G146000 Sobic009G142200--Sobic003G146000 Sobic003G000600 Sobic003G000600 Sobic009G142200--Sobic003G000600 Sobic008G144500 Sobic008G144500 Sobic009G142200--Sobic008G144500 Sobic002G379866 Sobic002G379866 Sobic009G142200--Sobic002G379866 Sobic010G182966 Sobic010G182966 Sobic009G142200--Sobic010G182966 Sobic004G236550 Sobic004G236550 Sobic009G142200--Sobic004G236550 Sobic002G355200 Sobic002G355200 Sobic009G142200--Sobic002G355200 Sobic001G028000 Sobic001G028000 Sobic009G142200--Sobic001G028000 Sobic002G012800 Sobic002G012800 Sobic003G348700--Sobic002G012800 Sobic003G348700--Sobic003G146000 Sobic006G208100 Sobic006G208100 Sobic003G348700--Sobic006G208100 Sobic003G348700--Sobic009G142200 Sobic008G058900 Sobic008G058900 Sobic003G348700--Sobic008G058900 Sobic002G135800 Sobic002G135800 Sobic003G348700--Sobic002G135800 Sobic003G363200 Sobic003G363200 Sobic003G348700--Sobic003G363200 Sobic002G188700 Sobic002G188700 Sobic003G348700--Sobic002G188700 Sobic003G348700--Sobic010G182966 Sobic003G424500 Sobic003G424500 Sobic003G146000--Sobic003G424500 Sobic010G238400 Sobic010G238400 Sobic003G146000--Sobic010G238400 Sobic010G247500 Sobic010G247500 Sobic003G146000--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G146000--Sobic010G105500 Sobic003G146000--Sobic003G348700 Sobic009G068900 Sobic009G068900 Sobic003G146000--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic003G146000--Sobic004G176900 Sobic009G212800 Sobic009G212800 Sobic003G146000--Sobic009G212800 Sobic004G300300 Sobic004G300300 Sobic003G146000--Sobic004G300300 Sobic003G000600--Sobic008G144500 Sobic006G086100 Sobic006G086100 Sobic003G000600--Sobic006G086100 Sobic003G000600--Sobic009G142200 Sobic003G000600--Sobic003G146000 Sobic006G086000 Sobic006G086000 Sobic003G000600--Sobic006G086000 Sobic007G125900 Sobic007G125900 Sobic003G000600--Sobic007G125900 Sobic003G000600--Sobic001G028000 Sobic003G000600--Sobic004G236550 Sobic003G000600--Sobic002G355200 Sobic008G144500--Sobic010G182966 Sobic009G038501 Sobic009G038501 Sobic008G144500--Sobic009G038501 Sobic008G144500--Sobic002G355200 Sobic009G236300 Sobic009G236300 Sobic008G144500--Sobic009G236300 Sobic008G144500--Sobic003G000600 Sobic008G144500--Sobic009G142200 Sobic008G144500--Sobic006G086100 Sobic008G144500--Sobic003G348700 Sobic005G215766 Sobic005G215766 Sobic008G144500--Sobic005G215766 Sobic003G146100 Sobic003G146100 Sobic002G379866--Sobic003G146100 Sobic001G157200 Sobic001G157200 Sobic002G379866--Sobic001G157200 Sobic002G222800 Sobic002G222800 Sobic002G379866--Sobic002G222800 Sobic001G074200 Sobic001G074200 Sobic002G379866--Sobic001G074200 Sobic002G118600 Sobic002G118600 Sobic002G379866--Sobic002G118600 Sobic006G078400 Sobic006G078400 Sobic002G379866--Sobic006G078400 Sobic004G158901 Sobic004G158901 Sobic002G379866--Sobic004G158901 Sobic001G147200 Sobic001G147200 Sobic002G379866--Sobic001G147200 Sobic002G224100 Sobic002G224100 Sobic002G379866--Sobic002G224100 Sobic010G182966--Sobic008G144500 Sobic010G182966--Sobic003G348700 Sobic010G182966--Sobic009G142200 Sobic003G189200 Sobic003G189200 Sobic010G182966--Sobic003G189200 Sobic010G182966--Sobic002G012800 Sobic010G182966--Sobic003G000600 Sobic003G232900 Sobic003G232900 Sobic010G182966--Sobic003G232900 Sobic010G182966--Sobic009G038501 Sobic010G182966--Sobic002G355200 Sobic009G079300 Sobic009G079300 Sobic004G236550--Sobic009G079300 Sobic004G236550--Sobic002G355200 Sobic009G136100 Sobic009G136100 Sobic004G236550--Sobic009G136100 Sobic003G332000 Sobic003G332000 Sobic004G236550--Sobic003G332000 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic009G118600 Sobic009G118600 Sobic004G236550--Sobic009G118600 Sobic006G115300 Sobic006G115300 Sobic004G236550--Sobic006G115300 Sobic002G225300 Sobic002G225300 Sobic004G236550--Sobic002G225300 Sobic001G151800 Sobic001G151800 Sobic002G355200--Sobic001G151800 Sobic002G355200--Sobic008G144500 Sobic009G236200 Sobic009G236200 Sobic002G355200--Sobic009G236200 Sobic002G355200--Sobic007G125900 Sobic002G355200--Sobic004G236550 Sobic002G355200--Sobic005G016800 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic001G028000--Sobic003G363200 Sobic005G139700 Sobic005G139700 Sobic001G028000--Sobic005G139700 Sobic009G030600 Sobic009G030600 Sobic001G028000--Sobic009G030600 Sobic003G268900 Sobic003G268900 Sobic001G028000--Sobic003G268900 Sobic002G197600 Sobic002G197600 Sobic001G028000--Sobic002G197600 Sobic001G028000--Sobic003G424500 Sobic001G028000--Sobic006G078400 Sobic002G217100 Sobic002G217100 Sobic001G028000--Sobic002G217100 Sobic009G044400 Sobic009G044400 Sobic001G028000--Sobic009G044400
Octagon: transcription factors


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