Gene annotation
Transcriptome id Sobic.009G236300.1
Synonym Sb09g028880
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt A0A1B6PA52
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF4
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G53810 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os07g03900.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a050568
Brachypodium KQK20956
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
2 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
3 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.002G107800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
5 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
6 Sobic.009G118600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
7 Sobic.009G038501 - -
8 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G142200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
10 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.005G215766 - -
12 Sobic.004G236550 - -
13 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
14 Sobic.007G003500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.001G027800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
18 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
20 Sobic.006G115300 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic009G236300 Sobic009G236300 Sobic008G144500 Sobic008G144500 Sobic009G236300--Sobic008G144500 Sobic002G355200 Sobic002G355200 Sobic009G236300--Sobic002G355200 Sobic001G235500 Sobic001G235500 Sobic009G236300--Sobic001G235500 Sobic002G107800 Sobic002G107800 Sobic009G236300--Sobic002G107800 Sobic006G086100 Sobic006G086100 Sobic009G236300--Sobic006G086100 Sobic009G118600 Sobic009G118600 Sobic009G236300--Sobic009G118600 Sobic009G038501 Sobic009G038501 Sobic009G236300--Sobic009G038501 Sobic001G298500 Sobic001G298500 Sobic009G236300--Sobic001G298500 Sobic009G142200 Sobic009G142200 Sobic009G236300--Sobic009G142200 Sobic010G182966 Sobic010G182966 Sobic008G144500--Sobic010G182966 Sobic008G144500--Sobic009G038501 Sobic008G144500--Sobic002G355200 Sobic008G144500--Sobic009G236300 Sobic003G000600 Sobic003G000600 Sobic008G144500--Sobic003G000600 Sobic008G144500--Sobic009G142200 Sobic008G144500--Sobic006G086100 Sobic003G348700 Sobic003G348700 Sobic008G144500--Sobic003G348700 Sobic005G215766 Sobic005G215766 Sobic008G144500--Sobic005G215766 Sobic001G151800 Sobic001G151800 Sobic002G355200--Sobic001G151800 Sobic002G355200--Sobic008G144500 Sobic009G236200 Sobic009G236200 Sobic002G355200--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic002G355200--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic002G355200--Sobic004G236550 Sobic005G016800 Sobic005G016800 Sobic002G355200--Sobic005G016800 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic009G136100 Sobic009G136100 Sobic001G235500--Sobic009G136100 Sobic001G235500--Sobic009G118600 Sobic001G235500--Sobic005G215766 Sobic006G115300 Sobic006G115300 Sobic001G235500--Sobic006G115300 Sobic004G200800 Sobic004G200800 Sobic001G235500--Sobic004G200800 Sobic001G235500--Sobic009G236300 Sobic006G146100 Sobic006G146100 Sobic001G235500--Sobic006G146100 Sobic001G235500--Sobic006G086100 Sobic009G097300 Sobic009G097300 Sobic001G235500--Sobic009G097300 Sobic002G107800--Sobic009G236300 Sobic002G155400 Sobic002G155400 Sobic002G107800--Sobic002G155400 Sobic008G044000 Sobic008G044000 Sobic002G107800--Sobic008G044000 Sobic002G107800--Sobic001G298500 Sobic003G316300 Sobic003G316300 Sobic002G107800--Sobic003G316300 Sobic001G386400 Sobic001G386400 Sobic002G107800--Sobic001G386400 Sobic002G266200 Sobic002G266200 Sobic002G107800--Sobic002G266200 Sobic002G107800--Sobic006G119200 Sobic002G107800--Sobic009G038501 Sobic006G086100--Sobic003G000600 Sobic006G086100--Sobic004G236550 Sobic006G086100--Sobic009G118600 Sobic006G086100--Sobic008G144500 Sobic008G190900 Sobic008G190900 Sobic006G086100--Sobic008G190900 Sobic006G086100--Sobic001G235500 Sobic006G086100--Sobic006G115300 Sobic003G281900 Sobic003G281900 Sobic006G086100--Sobic003G281900 Sobic006G086100--Sobic009G236300 Sobic009G118600--Sobic001G235500 Sobic009G118600--Sobic006G115300 Sobic003G269800 Sobic003G269800 Sobic009G118600--Sobic003G269800 Sobic009G118600--Sobic009G136100 Sobic009G118600--Sobic006G086100 Sobic009G118600--Sobic004G236550 Sobic009G118600--Sobic005G215766 Sobic009G118600--Sobic009G097300 Sobic003G332000 Sobic003G332000 Sobic009G118600--Sobic003G332000 Sobic009G038501--Sobic008G144500 Sobic004G236600 Sobic004G236600 Sobic009G038501--Sobic004G236600 Sobic004G236000 Sobic004G236000 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic001G251900 Sobic001G251900 Sobic009G038501--Sobic001G251900 Sobic005G152100 Sobic005G152100 Sobic009G038501--Sobic005G152100 Sobic001G212000 Sobic001G212000 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G038501--Sobic009G236200 Sobic009G000200 Sobic009G000200 Sobic001G298500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G298500--Sobic009G079300 Sobic006G271200 Sobic006G271200 Sobic001G298500--Sobic006G271200 Sobic001G350700 Sobic001G350700 Sobic001G298500--Sobic001G350700 Sobic008G189200 Sobic008G189200 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic009G142200--Sobic003G348700 Sobic003G146000 Sobic003G146000 Sobic009G142200--Sobic003G146000 Sobic009G142200--Sobic003G000600 Sobic009G142200--Sobic008G144500 Sobic002G379866 Sobic002G379866 Sobic009G142200--Sobic002G379866 Sobic009G142200--Sobic010G182966 Sobic009G142200--Sobic004G236550 Sobic009G142200--Sobic002G355200 Sobic001G028000 Sobic001G028000 Sobic009G142200--Sobic001G028000
Octagon: transcription factors


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