Gene annotation
Transcriptome id Sobic.002G107800.2
Synonym RLK, Sb02g009160
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
lectin-like receptor kinase, putative, expressed
UniProt A0A1W0W3E1
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os07g18230.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a045639
Brachypodium PNT61561 , KQK19470
Barley HORVU3Hr1G015210.1 , HORVU2Hr1G120660.5 , HORVU2Hr1G120660.3 , HORVU2Hr1G120660.7 , HORVU2Hr1G120660.6
Wheat TraesCS7A02G139900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
2 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
3 Sobic.008G044000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
4 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
6 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
7 Sobic.002G266200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
9 Sobic.009G038501 - -
10 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
11 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
12 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
13 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
14 Sobic.003G259800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
16 Sobic.009G197700 expressed protein -
17 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
18 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -
19 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
20 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G107800 Sobic002G107800 Sobic009G236300 Sobic009G236300 Sobic002G107800--Sobic009G236300 Sobic002G155400 Sobic002G155400 Sobic002G107800--Sobic002G155400 Sobic008G044000 Sobic008G044000 Sobic002G107800--Sobic008G044000 Sobic001G298500 Sobic001G298500 Sobic002G107800--Sobic001G298500 Sobic003G316300 Sobic003G316300 Sobic002G107800--Sobic003G316300 Sobic001G386400 Sobic001G386400 Sobic002G107800--Sobic001G386400 Sobic002G266200 Sobic002G266200 Sobic002G107800--Sobic002G266200 Sobic006G119200 Sobic006G119200 Sobic002G107800--Sobic006G119200 Sobic009G038501 Sobic009G038501 Sobic002G107800--Sobic009G038501 Sobic008G144500 Sobic008G144500 Sobic009G236300--Sobic008G144500 Sobic002G355200 Sobic002G355200 Sobic009G236300--Sobic002G355200 Sobic001G235500 Sobic001G235500 Sobic009G236300--Sobic001G235500 Sobic009G236300--Sobic002G107800 Sobic006G086100 Sobic006G086100 Sobic009G236300--Sobic006G086100 Sobic009G118600 Sobic009G118600 Sobic009G236300--Sobic009G118600 Sobic009G236300--Sobic009G038501 Sobic009G236300--Sobic001G298500 Sobic009G142200 Sobic009G142200 Sobic009G236300--Sobic009G142200 Sobic002G155400--Sobic001G386400 Sobic009G161401 Sobic009G161401 Sobic002G155400--Sobic009G161401 Sobic002G155400--Sobic006G119200 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic001G512800 Sobic001G512800 Sobic002G155400--Sobic001G512800 Sobic004G341200 Sobic004G341200 Sobic002G155400--Sobic004G341200 Sobic004G106900 Sobic004G106900 Sobic002G155400--Sobic004G106900 Sobic003G219600 Sobic003G219600 Sobic008G044000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic008G044000--Sobic009G211400 Sobic008G044000--Sobic002G155400 Sobic004G246200 Sobic004G246200 Sobic008G044000--Sobic004G246200 Sobic005G018500 Sobic005G018500 Sobic008G044000--Sobic005G018500 Sobic009G029600 Sobic009G029600 Sobic008G044000--Sobic009G029600 Sobic008G044000--Sobic001G512800 Sobic005G152100 Sobic005G152100 Sobic008G044000--Sobic005G152100 Sobic003G259200 Sobic003G259200 Sobic008G044000--Sobic003G259200 Sobic009G000200 Sobic009G000200 Sobic001G298500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G298500--Sobic009G079300 Sobic006G271200 Sobic006G271200 Sobic001G298500--Sobic006G271200 Sobic001G350700 Sobic001G350700 Sobic001G298500--Sobic001G350700 Sobic008G189200 Sobic008G189200 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic003G316300--Sobic009G000200 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic003G316300--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic003G316300--Sobic009G167700 Sobic001G273500 Sobic001G273500 Sobic003G316300--Sobic001G273500 Sobic004G125900 Sobic004G125900 Sobic003G316300--Sobic004G125900 Sobic003G316300--Sobic001G298500 Sobic009G200300 Sobic009G200300 Sobic003G316300--Sobic009G200300 Sobic001G386400--Sobic006G119200 Sobic001G386400--Sobic009G167700 Sobic001G386400--Sobic009G000200 Sobic001G386400--Sobic003G316300 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic001G386400--Sobic004G341200 Sobic003G138200 Sobic003G138200 Sobic002G266200--Sobic003G138200 Sobic001G249300 Sobic001G249300 Sobic002G266200--Sobic001G249300 Sobic001G150200 Sobic001G150200 Sobic002G266200--Sobic001G150200 Sobic002G215700 Sobic002G215700 Sobic002G266200--Sobic002G215700 Sobic009G054500 Sobic009G054500 Sobic002G266200--Sobic009G054500 Sobic007G186200 Sobic007G186200 Sobic002G266200--Sobic007G186200 Sobic007G187300 Sobic007G187300 Sobic002G266200--Sobic007G187300 Sobic009G226300 Sobic009G226300 Sobic002G266200--Sobic009G226300 Sobic002G266200--Sobic001G512800 Sobic006G119200--Sobic001G386400 Sobic001G132000 Sobic001G132000 Sobic006G119200--Sobic001G132000 Sobic010G016400 Sobic010G016400 Sobic006G119200--Sobic010G016400 Sobic006G119200--Sobic009G167700 Sobic006G119200--Sobic002G155400 Sobic009G234800 Sobic009G234800 Sobic006G119200--Sobic009G234800 Sobic006G119200--Sobic001G512800 Sobic005G231900 Sobic005G231900 Sobic006G119200--Sobic005G231900 Sobic004G347300 Sobic004G347300 Sobic006G119200--Sobic004G347300 Sobic009G038501--Sobic008G144500 Sobic004G236600 Sobic004G236600 Sobic009G038501--Sobic004G236600 Sobic004G236000 Sobic004G236000 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic001G251900 Sobic001G251900 Sobic009G038501--Sobic001G251900 Sobic009G038501--Sobic005G152100 Sobic001G212000 Sobic001G212000 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G236200 Sobic009G236200 Sobic009G038501--Sobic009G236200
Octagon: transcription factors


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