Gene annotation
Transcriptome id Sobic.008G044000.1
Synonym Sb08g003770, LHW
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
expressed protein
UniProt C5YS76
Pfam PF14215
Panther DB PTHR13902 PTHR13902:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27230 : transcription factor-related
RAP-DB (Rice) LOC_Os12g06330.2 : CPuORF6 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a012935 , Zm00025a034142 , Zm00025a025792 , Zm00025a053958
Brachypodium KQJ92159
Barley HORVU4Hr1G020740.17 , HORVU4Hr1G020740.16 , HORVU4Hr1G020740.15 , HORVU4Hr1G020740.14 , HORVU4Hr1G020740.13 , HORVU4Hr1G020740.12 , HORVU4Hr1G020740.11 , HORVU4Hr1G020740.10 , HORVU5Hr1G040090.10 , HORVU4Hr1G020740.7 , HORVU4Hr1G020740.6 , HORVU5Hr1G040090.11 , HORVU4Hr1G020740.3 , HORVU5Hr1G040090.1 , HORVU5Hr1G040090.2 , HORVU5Hr1G040090.3 , HORVU5Hr1G040090.4 , HORVU5Hr1G040090.5 , HORVU5Hr1G040090.6 , HORVU5Hr1G040090.7 , HORVU5Hr1G040090.8 , HORVU5Hr1G040090.9 , HORVU4Hr1G020740.9 , HORVU4Hr1G020740.8 , HORVU5Hr1G040090.12 , HORVU5Hr1G040090.13 , HORVU4Hr1G020740.5 , HORVU4Hr1G020740.4 , HORVU5Hr1G040090.16 , HORVU4Hr1G020740.2 , HORVU5Hr1G040090.14 , HORVU5Hr1G040090.15 , HORVU4Hr1G020740.1
Wheat TraesCS4A02G200700 , TraesCS5A02G125200 , TraesCS5A02G125200 , TraesCS5A02G125200 , TraesCS5D02G132900 , TraesCS5D02G132900 , TraesCS5D02G132900 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS4B02G114800 , TraesCS5D02G132900 , TraesCS5D02G132900 , TraesCS5D02G132900 , TraesCS4D02G112100 , TraesCS5B02G124700 , TraesCS5B02G124700 , TraesCS4A02G200700 , TraesCS4A02G200700 , TraesCS4A02G200700 , TraesCS5B02G124700 , TraesCS5B02G124700 , TraesCS4D02G112100 , TraesCS4D02G112100
Populus PNT55910


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
2 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
4 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
5 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
6 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
7 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
8 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
9 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
10 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
11 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
13 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
15 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
16 Sobic.002G409500 lipase precursor, putative, expressed -
17 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
18 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
19 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
20 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1


Gene co-expression network
sample Sobic008G044000 Sobic008G044000 Sobic003G219600 Sobic003G219600 Sobic008G044000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic008G044000--Sobic009G211400 Sobic002G155400 Sobic002G155400 Sobic008G044000--Sobic002G155400 Sobic004G246200 Sobic004G246200 Sobic008G044000--Sobic004G246200 Sobic005G018500 Sobic005G018500 Sobic008G044000--Sobic005G018500 Sobic009G029600 Sobic009G029600 Sobic008G044000--Sobic009G029600 Sobic001G512800 Sobic001G512800 Sobic008G044000--Sobic001G512800 Sobic005G152100 Sobic005G152100 Sobic008G044000--Sobic005G152100 Sobic003G259200 Sobic003G259200 Sobic008G044000--Sobic003G259200 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G219600--Sobic003G259200 Sobic009G054500 Sobic009G054500 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic004G255000 Sobic004G255000 Sobic003G219600--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic003G219600--Sobic001G249300 Sobic004G260000 Sobic004G260000 Sobic003G219600--Sobic004G260000 Sobic009G226300 Sobic009G226300 Sobic003G219600--Sobic009G226300 Sobic009G211400--Sobic003G219600 Sobic010G107000 Sobic010G107000 Sobic009G211400--Sobic010G107000 Sobic009G211400--Sobic009G029600 Sobic003G138200 Sobic003G138200 Sobic009G211400--Sobic003G138200 Sobic009G211400--Sobic004G260000 Sobic002G215800 Sobic002G215800 Sobic009G211400--Sobic002G215800 Sobic009G211400--Sobic009G054500 Sobic009G193700 Sobic009G193700 Sobic009G211400--Sobic009G193700 Sobic009G211400--Sobic005G018500 Sobic001G386400 Sobic001G386400 Sobic002G155400--Sobic001G386400 Sobic009G161401 Sobic009G161401 Sobic002G155400--Sobic009G161401 Sobic006G119200 Sobic006G119200 Sobic002G155400--Sobic006G119200 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic002G155400--Sobic001G512800 Sobic004G341200 Sobic004G341200 Sobic002G155400--Sobic004G341200 Sobic004G106900 Sobic004G106900 Sobic002G155400--Sobic004G106900 Sobic004G246200--Sobic005G152100 Sobic004G246200--Sobic005G018500 Sobic004G246200--Sobic003G259200 Sobic004G246200--Sobic004G255000 Sobic001G412700 Sobic001G412700 Sobic004G246200--Sobic001G412700 Sobic004G246200--Sobic004G260000 Sobic004G246200--Sobic002G322900 Sobic004G246200--Sobic009G054500 Sobic008G024400 Sobic008G024400 Sobic004G246200--Sobic008G024400 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic007G187300 Sobic007G187300 Sobic005G018500--Sobic007G187300 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic001G512800--Sobic003G138200 Sobic001G512800--Sobic002G322900 Sobic001G512800--Sobic010G206000 Sobic001G512800--Sobic004G246200 Sobic002G409500 Sobic002G409500 Sobic001G512800--Sobic002G409500 Sobic001G512800--Sobic009G029600 Sobic010G248900 Sobic010G248900 Sobic001G512800--Sobic010G248900 Sobic001G512800--Sobic009G054500 Sobic005G079900 Sobic005G079900 Sobic001G512800--Sobic005G079900 Sobic005G152100--Sobic004G246200 Sobic004G236600 Sobic004G236600 Sobic005G152100--Sobic004G236600 Sobic005G152100--Sobic005G018500 Sobic005G152100--Sobic004G255000 Sobic005G152100--Sobic001G249300 Sobic005G152100--Sobic003G259200 Sobic005G152100--Sobic002G322900 Sobic005G152100--Sobic009G054500 Sobic005G152100--Sobic001G412700 Sobic003G259200--Sobic009G054500 Sobic003G259200--Sobic005G018500 Sobic003G259200--Sobic001G249300 Sobic003G259200--Sobic003G219600 Sobic003G259200--Sobic004G255000 Sobic003G259200--Sobic009G226300 Sobic003G259200--Sobic009G029600 Sobic005G151700 Sobic005G151700 Sobic003G259200--Sobic005G151700 Sobic003G259200--Sobic007G187300
Octagon: transcription factors


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