Gene annotation
Transcriptome id Sobic.003G259200.1
Synonym GLYK
Functional annotation - (PubMedID : 26976818)
uncharacterized kinase mug58, putative, expressed
UniProt A0A1B6Q5D2
Pfam -
Panther DB PTHR10285 PTHR10285:SF78
NCBI CDD KOG2878; Predicted kinase
KEGG Orthology K15918; D-glycerate 3-kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80380 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g48990.1 : uncharacterized kinase mug58, putative, expressed
MaizeGDB (Corn) Zm00025a040988 , Zm00025a028016
Brachypodium KQK09211 , KQK09210
Barley HORVU3Hr1G063280.14 , HORVU3Hr1G063280.12 , HORVU3Hr1G063280.13 , HORVU3Hr1G063280.10 , HORVU3Hr1G063280.11 , HORVU3Hr1G063280.4 , HORVU3Hr1G063280.5 , HORVU3Hr1G063280.6 , HORVU3Hr1G063280.7 , HORVU3Hr1G063280.2 , HORVU3Hr1G063280.3 , HORVU3Hr1G063280.8
Wheat TraesCS3D02G266100 , TraesCS3D02G266100 , TraesCS3B02G299300 , TraesCS3B02G299300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
2 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
3 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
4 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
5 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
8 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
9 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
12 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
13 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.006G030700 receptor kinase, putative, expressed -
18 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
19 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
20 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)


Gene co-expression network
sample Sobic003G259200 Sobic003G259200 Sobic009G054500 Sobic009G054500 Sobic003G259200--Sobic009G054500 Sobic005G018500 Sobic005G018500 Sobic003G259200--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic003G259200--Sobic001G249300 Sobic003G219600 Sobic003G219600 Sobic003G259200--Sobic003G219600 Sobic004G255000 Sobic004G255000 Sobic003G259200--Sobic004G255000 Sobic009G226300 Sobic009G226300 Sobic003G259200--Sobic009G226300 Sobic009G029600 Sobic009G029600 Sobic003G259200--Sobic009G029600 Sobic005G151700 Sobic005G151700 Sobic003G259200--Sobic005G151700 Sobic007G187300 Sobic007G187300 Sobic003G259200--Sobic007G187300 Sobic009G054500--Sobic009G226300 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic004G260000 Sobic004G260000 Sobic009G054500--Sobic004G260000 Sobic003G148800 Sobic003G148800 Sobic009G054500--Sobic003G148800 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic006G100332 Sobic006G100332 Sobic009G054500--Sobic006G100332 Sobic002G215700 Sobic002G215700 Sobic009G054500--Sobic002G215700 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300 Sobic001G280200 Sobic001G280200 Sobic001G249300--Sobic001G280200 Sobic001G249300--Sobic009G226300 Sobic001G249300--Sobic009G054500 Sobic001G249300--Sobic007G187300 Sobic003G138200 Sobic003G138200 Sobic001G249300--Sobic003G138200 Sobic006G030700 Sobic006G030700 Sobic001G249300--Sobic006G030700 Sobic001G249300--Sobic004G255000 Sobic001G249300--Sobic003G259200 Sobic001G249300--Sobic009G029600 Sobic009G211400 Sobic009G211400 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G219600--Sobic003G259200 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic003G219600--Sobic004G255000 Sobic003G219600--Sobic001G249300 Sobic003G219600--Sobic004G260000 Sobic003G219600--Sobic009G226300 Sobic004G255000--Sobic009G029600 Sobic004G255000--Sobic005G018500 Sobic004G255000--Sobic001G249300 Sobic004G255000--Sobic009G054500 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G255000--Sobic004G260000 Sobic004G255000--Sobic003G219600 Sobic005G152100 Sobic005G152100 Sobic004G255000--Sobic005G152100 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic001G325200 Sobic001G325200 Sobic009G226300--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic009G029600--Sobic004G255000 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic010G098100 Sobic010G098100 Sobic005G151700--Sobic010G098100 Sobic001G483500 Sobic001G483500 Sobic005G151700--Sobic001G483500 Sobic005G151700--Sobic007G187300 Sobic005G151700--Sobic003G259200 Sobic005G151700--Sobic003G219600 Sobic005G151700--Sobic009G211400 Sobic005G151700--Sobic001G249300 Sobic005G151700--Sobic005G018500 Sobic005G151700--Sobic009G029600 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic007G187300--Sobic001G280200 Sobic007G187300--Sobic005G018500 Sobic007G187300--Sobic004G260000
Octagon: transcription factors


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