Gene annotation
Transcriptome id Sobic.005G018500.1
Synonym NAP, ATNAP, ANAC029, Sb05g001580
Functional annotation NAC domain transcription factor, putative, expressed
UniProt C5Y3M1
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G69490 : NAC-like, activated by AP3/PI
RAP-DB (Rice) LOC_Os11g03300.1 : NAC domain transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053477 , Zm00025a002287 , Zm00025a013388 , Zm00025a049186 , Zm00025a035397 , Zm00025a056131 , Zm00025a032141 , Zm00025a053749 , Zm00025a052457 , Zm00025a041401 , Zm00025a020964 , Zm00025a050329 , Zm00025a000360 , Zm00025a050155 , Zm00025a040250 , Zm00025a011264
Brachypodium KQJ94869 , KQJ94263 , KQJ94262 , KQK18102 , KQK02753 , KQK19730 , KQK10307 , PNT78278 , KQK18101 , PNT76724 , KQK20059 , KQJ82828 , KQK23882 , PNT76596
Barley HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.5 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.6 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU3Hr1G080100.4 , HORVU3Hr1G080100.5 , HORVU3Hr1G080100.6 , HORVU3Hr1G080100.7 , HORVU3Hr1G080100.3 , HORVU7Hr1G075550.1 , HORVU7Hr1G075550.7 , HORVU7Hr1G075550.6 , HORVU7Hr1G075550.5 , HORVU3Hr1G094170.1 , HORVU6Hr1G060800.2 , HORVU6Hr1G060800.3 , HORVU6Hr1G060800.1 , HORVU6Hr1G060800.6 , HORVU6Hr1G060800.7 , HORVU6Hr1G060800.4 , HORVU6Hr1G060800.5 , HORVU7Hr1G079500.4 , HORVU7Hr1G079500.1 , HORVU7Hr1G079500.2 , HORVU7Hr1G079500.3 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU4Hr1G083050.12 , HORVU4Hr1G083050.10 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU0Hr1G028970.1 , HORVU0Hr1G028970.2 , HORVU6Hr1G019380.5 , HORVU6Hr1G019380.4 , HORVU6Hr1G019380.3 , HORVU6Hr1G019380.2 , HORVU7Hr1G012780.7 , HORVU0Hr1G026330.4 , HORVU0Hr1G026330.5 , HORVU0Hr1G026330.6 , HORVU0Hr1G026330.1 , HORVU0Hr1G026330.2 , HORVU2Hr1G004130.1 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12 , HORVU7Hr1G012780.9 , HORVU7Hr1G012780.8 , HORVU7Hr1G012780.5 , HORVU7Hr1G012780.4 , HORVU7Hr1G012780.6 , HORVU7Hr1G012780.1 , HORVU7Hr1G012780.3 , HORVU7Hr1G012780.2 , HORVU6Hr1G060800.8 , HORVU6Hr1G060800.9 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.5 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.6 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU5Hr1G045650.2 , HORVU2Hr1G017460.10 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.14 , HORVU2Hr1G017460.8 , HORVU2Hr1G017460.9 , HORVU2Hr1G017460.2 , HORVU2Hr1G017460.3 , HORVU2Hr1G017460.6 , HORVU2Hr1G017460.7 , HORVU2Hr1G017460.4 , HORVU2Hr1G017460.5 , HORVU2Hr1G039640.2 , HORVU4Hr1G089660.1 , HORVU2Hr1G039640.3 , HORVU2Hr1G039640.4
Wheat TraesCS4A02G421300 , TraesCS2B02G328300 , TraesCS2B02G119000 , TraesCS3B02G194000 , TraesCS3B02G371200 , TraesCS7D02G062100 , TraesCS3D02G333100 , TraesCS7D02G063300 , TraesCS2A02G311500 , TraesCS4A02G421200 , TraesCS7A02G068300 , TraesCS6A02G108300 , TraesCS6A02G108300 , TraesCS7A02G317100 , TraesCS7A02G317100 , TraesCS3B02G093300 , TraesCS4A02G419900 , TraesCS3A02G339600 , TraesCS3A02G339600 , TraesCS2A02G201800 , TraesCS2A02G201800 , TraesCS2A02G101900 , TraesCS2B02G119100 , TraesCS5A02G491700 , TraesCS7D02G062600 , TraesCS2D02G101400 , TraesCS4B02G320300 , TraesCS7D02G314000 , TraesCS7D02G314000 , TraesCS6D02G220600 , TraesCS4A02G421100 , TraesCS4A02G420900 , TraesCS2A02G102000 , TraesCS4D02G316800 , TraesCS2D02G309800 , TraesCS7B02G233300 , TraesCS4A02G420000 , TraesCS3A02G162900 , TraesCS2D02G214100 , TraesCS7D02G329200 , TraesCS7A02G349500 , TraesCS3D02G170000 , TraesCS7D02G062300 , TraesCS7A02G068000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
2 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
4 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
5 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
7 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
8 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
9 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
11 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
12 Sobic.006G100332 - -
13 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
14 Sobic.007G219900 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
15 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
16 Sobic.006G030700 receptor kinase, putative, expressed -
17 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
20 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase


Gene co-expression network
sample Sobic005G018500 Sobic005G018500 Sobic009G054500 Sobic009G054500 Sobic005G018500--Sobic009G054500 Sobic004G260000 Sobic004G260000 Sobic005G018500--Sobic004G260000 Sobic004G255000 Sobic004G255000 Sobic005G018500--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic005G018500--Sobic003G259200 Sobic009G226300 Sobic009G226300 Sobic005G018500--Sobic009G226300 Sobic001G249300 Sobic001G249300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic003G219600 Sobic003G219600 Sobic005G018500--Sobic003G219600 Sobic007G187300 Sobic007G187300 Sobic005G018500--Sobic007G187300 Sobic009G054500--Sobic009G226300 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic009G054500--Sobic004G260000 Sobic009G054500--Sobic003G148800 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic006G100332 Sobic006G100332 Sobic009G054500--Sobic006G100332 Sobic002G215700 Sobic002G215700 Sobic009G054500--Sobic002G215700 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic008G062200 Sobic008G062200 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic004G260000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic004G260000--Sobic009G211400 Sobic009G029600 Sobic009G029600 Sobic004G255000--Sobic009G029600 Sobic004G255000--Sobic005G018500 Sobic004G255000--Sobic001G249300 Sobic004G255000--Sobic009G054500 Sobic001G280200 Sobic001G280200 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G255000--Sobic004G260000 Sobic004G255000--Sobic003G219600 Sobic005G152100 Sobic005G152100 Sobic004G255000--Sobic005G152100 Sobic003G259200--Sobic009G054500 Sobic003G259200--Sobic005G018500 Sobic003G259200--Sobic001G249300 Sobic003G259200--Sobic003G219600 Sobic003G259200--Sobic004G255000 Sobic003G259200--Sobic009G226300 Sobic003G259200--Sobic009G029600 Sobic005G151700 Sobic005G151700 Sobic003G259200--Sobic005G151700 Sobic003G259200--Sobic007G187300 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic001G325200 Sobic001G325200 Sobic009G226300--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic001G249300--Sobic001G280200 Sobic001G249300--Sobic009G226300 Sobic001G249300--Sobic009G054500 Sobic001G249300--Sobic007G187300 Sobic003G138200 Sobic003G138200 Sobic001G249300--Sobic003G138200 Sobic001G249300--Sobic006G030700 Sobic001G249300--Sobic004G255000 Sobic001G249300--Sobic003G259200 Sobic001G249300--Sobic009G029600 Sobic003G148800--Sobic009G226300 Sobic003G148800--Sobic009G054500 Sobic003G148800--Sobic001G325200 Sobic004G321800 Sobic004G321800 Sobic003G148800--Sobic004G321800 Sobic003G148800--Sobic002G304000 Sobic003G148800--Sobic005G018500 Sobic001G150600 Sobic001G150600 Sobic003G148800--Sobic001G150600 Sobic003G148800--Sobic006G100332 Sobic003G148800--Sobic006G030700 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G219600--Sobic003G259200 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic003G219600--Sobic004G255000 Sobic003G219600--Sobic001G249300 Sobic003G219600--Sobic004G260000 Sobic003G219600--Sobic009G226300 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic007G187300--Sobic001G280200 Sobic007G187300--Sobic005G018500 Sobic007G187300--Sobic004G260000
Octagon: transcription factors


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