Gene annotation
Transcriptome id Sobic.009G226300.2
Synonym Sb09g027950
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1B6PA77
Pfam PF14226
Panther DB PTHR10209 PTHR10209:SF216
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13400 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g48230.1 : expressed protein
MaizeGDB (Corn) Zm00025a036557 , Zm00025a044499
Brachypodium KQK04981
Barley HORVU1Hr1G084800.3 , HORVU1Hr1G084800.2 , HORVU1Hr1G084800.1 , HORVU1Hr1G084800.4
Wheat TraesCS1D02G392300 , TraesCS1A02G384000 , TraesCS1B02G410800 , TraesCS1B02G410800
Populus -


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cDNA sequences
Sobic.009G226300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
2 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
3 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G030700 receptor kinase, putative, expressed -
5 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
6 Sobic.006G100332 - -
7 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
8 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
9 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
11 Sobic.003G138200 expressed protein -
12 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
13 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
14 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
15 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
16 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
17 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
18 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
19 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase


Gene co-expression network
sample Sobic009G226300 Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic009G226300--Sobic009G054500 Sobic001G249300 Sobic001G249300 Sobic009G226300--Sobic001G249300 Sobic007G187300 Sobic007G187300 Sobic009G226300--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic009G226300--Sobic006G030700 Sobic003G148800 Sobic003G148800 Sobic009G226300--Sobic003G148800 Sobic006G100332 Sobic006G100332 Sobic009G226300--Sobic006G100332 Sobic001G325200 Sobic001G325200 Sobic009G226300--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic009G226300--Sobic002G304000 Sobic004G260000 Sobic004G260000 Sobic009G226300--Sobic004G260000 Sobic009G054500--Sobic009G226300 Sobic005G018500 Sobic005G018500 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic009G054500--Sobic004G260000 Sobic009G054500--Sobic003G148800 Sobic003G259200 Sobic003G259200 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic009G054500--Sobic006G100332 Sobic002G215700 Sobic002G215700 Sobic009G054500--Sobic002G215700 Sobic001G280200 Sobic001G280200 Sobic001G249300--Sobic001G280200 Sobic001G249300--Sobic009G226300 Sobic001G249300--Sobic009G054500 Sobic001G249300--Sobic007G187300 Sobic003G138200 Sobic003G138200 Sobic001G249300--Sobic003G138200 Sobic001G249300--Sobic006G030700 Sobic004G255000 Sobic004G255000 Sobic001G249300--Sobic004G255000 Sobic001G249300--Sobic003G259200 Sobic009G029600 Sobic009G029600 Sobic001G249300--Sobic009G029600 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic007G187300--Sobic001G280200 Sobic007G187300--Sobic005G018500 Sobic007G187300--Sobic004G260000 Sobic006G030700--Sobic007G187300 Sobic006G030700--Sobic009G226300 Sobic006G030700--Sobic001G249300 Sobic001G150600 Sobic001G150600 Sobic006G030700--Sobic001G150600 Sobic006G030700--Sobic001G280200 Sobic006G030700--Sobic009G054500 Sobic006G030700--Sobic006G100332 Sobic006G030700--Sobic009G029600 Sobic003G087200 Sobic003G087200 Sobic006G030700--Sobic003G087200 Sobic003G148800--Sobic009G226300 Sobic003G148800--Sobic009G054500 Sobic003G148800--Sobic001G325200 Sobic004G321800 Sobic004G321800 Sobic003G148800--Sobic004G321800 Sobic003G148800--Sobic002G304000 Sobic003G148800--Sobic005G018500 Sobic003G148800--Sobic001G150600 Sobic003G148800--Sobic006G100332 Sobic003G148800--Sobic006G030700 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic006G100332--Sobic007G187300 Sobic006G100332--Sobic006G030700 Sobic006G100332--Sobic001G249300 Sobic006G100332--Sobic003G148800 Sobic007G068100 Sobic007G068100 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic001G325200--Sobic004G321800 Sobic004G101900 Sobic004G101900 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic001G325200--Sobic009G054500 Sobic001G015500 Sobic001G015500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600 Sobic002G304000--Sobic009G226300 Sobic002G304000--Sobic009G054500 Sobic002G304000--Sobic004G101900 Sobic002G304000--Sobic003G148800 Sobic002G304000--Sobic002G215700 Sobic008G062200 Sobic008G062200 Sobic002G304000--Sobic008G062200 Sobic002G304000--Sobic001G325200 Sobic002G304000--Sobic003G355600 Sobic003G105800 Sobic003G105800 Sobic002G304000--Sobic003G105800 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic003G219600 Sobic003G219600 Sobic004G260000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic004G260000--Sobic009G211400
Octagon: transcription factors


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