Gene annotation
Transcriptome id Sobic.009G211400.1
Synonym Sb09g026716
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A1B6P9Y1
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF139
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71710 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os01g51890.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044359 , Zm00025a044355
Brachypodium PNT70818 , PNT70819 , KQK05200 , KQK05201 , KQK05202 , KQK05203
Barley HORVU1Hr1G080460.18 , HORVU1Hr1G080460.11 , HORVU1Hr1G080460.10 , HORVU1Hr1G080460.13 , HORVU1Hr1G080460.12 , HORVU1Hr1G080460.15 , HORVU1Hr1G080460.17 , HORVU1Hr1G080460.16 , HORVU1Hr1G080460.14 , HORVU1Hr1G080460.9 , HORVU1Hr1G080460.8 , HORVU1Hr1G080460.5 , HORVU1Hr1G080460.4 , HORVU1Hr1G080460.7 , HORVU1Hr1G080460.6 , HORVU1Hr1G080460.1 , HORVU1Hr1G080460.3 , HORVU1Hr1G080460.2
Wheat TraesCS1A02G357300 , TraesCS1D02G361500 , TraesCS1D02G361500 , TraesCS1B02G373800 , TraesCS1B02G373800 , TraesCS1B02G373800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
2 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
3 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
4 Sobic.003G138200 expressed protein -
5 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.002G215800 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
7 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
8 Sobic.009G193700 transmembrane protein 56, putative, expressed -
9 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
10 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
11 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
13 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
14 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
15 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -
16 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
17 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
18 Sobic.002G409500 lipase precursor, putative, expressed -
19 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -


Gene co-expression network
sample Sobic009G211400 Sobic009G211400 Sobic003G219600 Sobic003G219600 Sobic009G211400--Sobic003G219600 Sobic010G107000 Sobic010G107000 Sobic009G211400--Sobic010G107000 Sobic009G029600 Sobic009G029600 Sobic009G211400--Sobic009G029600 Sobic003G138200 Sobic003G138200 Sobic009G211400--Sobic003G138200 Sobic004G260000 Sobic004G260000 Sobic009G211400--Sobic004G260000 Sobic002G215800 Sobic002G215800 Sobic009G211400--Sobic002G215800 Sobic009G054500 Sobic009G054500 Sobic009G211400--Sobic009G054500 Sobic009G193700 Sobic009G193700 Sobic009G211400--Sobic009G193700 Sobic005G018500 Sobic005G018500 Sobic009G211400--Sobic005G018500 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G259200 Sobic003G259200 Sobic003G219600--Sobic003G259200 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic004G255000 Sobic004G255000 Sobic003G219600--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic003G219600--Sobic001G249300 Sobic003G219600--Sobic004G260000 Sobic009G226300 Sobic009G226300 Sobic003G219600--Sobic009G226300 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic003G355600 Sobic003G355600 Sobic010G107000--Sobic003G355600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic010G107000--Sobic009G029600 Sobic010G107000--Sobic009G226300 Sobic010G107000--Sobic003G138200 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic003G138200--Sobic001G249300 Sobic003G138200--Sobic009G226300 Sobic007G187300 Sobic007G187300 Sobic003G138200--Sobic007G187300 Sobic003G138200--Sobic001G150200 Sobic003G138200--Sobic009G054500 Sobic003G138200--Sobic009G211400 Sobic002G215700 Sobic002G215700 Sobic003G138200--Sobic002G215700 Sobic003G138200--Sobic004G260000 Sobic003G138200--Sobic001G325200 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic008G062200 Sobic008G062200 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic004G260000--Sobic003G219600 Sobic004G260000--Sobic009G211400 Sobic002G215800--Sobic009G029600 Sobic002G215800--Sobic009G211400 Sobic002G215800--Sobic003G219600 Sobic002G215800--Sobic004G255000 Sobic002G215800--Sobic001G249300 Sobic002G215800--Sobic001G280200 Sobic002G215800--Sobic003G138200 Sobic002G215800--Sobic004G260000 Sobic002G215800--Sobic010G107000 Sobic009G054500--Sobic009G226300 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic009G054500--Sobic004G260000 Sobic003G148800 Sobic003G148800 Sobic009G054500--Sobic003G148800 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic006G100332 Sobic006G100332 Sobic009G054500--Sobic006G100332 Sobic009G054500--Sobic002G215700 Sobic009G193700--Sobic010G107000 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic001G089800 Sobic001G089800 Sobic009G193700--Sobic001G089800 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300
Octagon: transcription factors


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