Gene annotation
Transcriptome id Sobic.003G257100.1
Synonym Sb03g031190, ECT8
Functional annotation YT521-B-like family domain containing protein, expressed
UniProt A0A1W0VYZ6
Pfam PF04146
Panther DB PTHR12357 PTHR12357:SF15
NCBI CDD KOG1901; Uncharacterized high-glucose-regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79270 : evolutionarily conserved C-terminal region 8
RAP-DB (Rice) LOC_Os01g48790.1 : YT521-B-like family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028048 , Zm00025a038832
Brachypodium KQK09193
Barley HORVU3Hr1G062620.1 , HORVU3Hr1G062620.3 , HORVU3Hr1G062620.2 , HORVU3Hr1G062620.5 , HORVU3Hr1G062620.4 , HORVU3Hr1G062620.7 , HORVU3Hr1G062620.6 , HORVU3Hr1G062620.9 , HORVU3Hr1G062620.8 , HORVU3Hr1G062620.12 , HORVU3Hr1G062620.11 , HORVU3Hr1G062620.10 , HORVU3Hr1G062620.13
Wheat TraesCS3B02G301100 , TraesCS3A02G267700 , TraesCS3D02G267900
Populus -


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cDNA sequences
Sobic.003G257100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
2 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
3 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
4 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
5 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
6 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
7 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
8 Sobic.006G030700 receptor kinase, putative, expressed -
9 Sobic.002G409500 lipase precursor, putative, expressed -
10 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
11 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
13 Sobic.009G193700 transmembrane protein 56, putative, expressed -
14 Sobic.001G282600 transporter family protein, putative, expressed -
15 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
16 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
17 Sobic.002G215800 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
18 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
19 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
20 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G257100 Sobic003G257100 Sobic009G029600 Sobic009G029600 Sobic003G257100--Sobic009G029600 Sobic006G199000 Sobic006G199000 Sobic003G257100--Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic003G257100--Sobic008G153400 Sobic003G398100 Sobic003G398100 Sobic003G257100--Sobic003G398100 Sobic010G107000 Sobic010G107000 Sobic003G257100--Sobic010G107000 Sobic002G352800 Sobic002G352800 Sobic003G257100--Sobic002G352800 Sobic009G211400 Sobic009G211400 Sobic003G257100--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic003G257100--Sobic006G030700 Sobic002G409500 Sobic002G409500 Sobic003G257100--Sobic002G409500 Sobic004G255000 Sobic004G255000 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic003G219600 Sobic003G219600 Sobic009G029600--Sobic003G219600 Sobic001G249300 Sobic001G249300 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic009G029600--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G226300 Sobic009G226300 Sobic009G029600--Sobic009G226300 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic006G199000--Sobic003G257100 Sobic003G355600 Sobic003G355600 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic008G153400--Sobic001G150600 Sobic008G153400--Sobic006G199000 Sobic008G153400--Sobic006G030700 Sobic008G153400--Sobic001G325200 Sobic008G153400--Sobic003G398100 Sobic008G153400--Sobic003G257100 Sobic003G087200 Sobic003G087200 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic008G153400--Sobic009G226300 Sobic003G398100--Sobic006G199000 Sobic003G398100--Sobic008G153400 Sobic009G207600 Sobic009G207600 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G398100--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic003G398100--Sobic003G322700 Sobic003G398100--Sobic001G150600 Sobic010G107000--Sobic009G211400 Sobic010G107000--Sobic001G325200 Sobic009G193700 Sobic009G193700 Sobic010G107000--Sobic009G193700 Sobic010G107000--Sobic003G355600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic010G107000--Sobic009G029600 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic002G352800--Sobic003G257100 Sobic006G204900 Sobic006G204900 Sobic002G352800--Sobic006G204900 Sobic003G320700 Sobic003G320700 Sobic002G352800--Sobic003G320700 Sobic002G352800--Sobic009G193700 Sobic002G352800--Sobic009G211400 Sobic002G352800--Sobic009G029600 Sobic002G292100 Sobic002G292100 Sobic002G352800--Sobic002G292100 Sobic002G352800--Sobic010G107000 Sobic002G352800--Sobic006G199000 Sobic009G211400--Sobic003G219600 Sobic009G211400--Sobic010G107000 Sobic009G211400--Sobic009G029600 Sobic009G211400--Sobic003G138200 Sobic004G260000 Sobic004G260000 Sobic009G211400--Sobic004G260000 Sobic009G211400--Sobic002G215800 Sobic009G211400--Sobic009G054500 Sobic009G211400--Sobic009G193700 Sobic005G018500 Sobic005G018500 Sobic009G211400--Sobic005G018500 Sobic007G187300 Sobic007G187300 Sobic006G030700--Sobic007G187300 Sobic006G030700--Sobic009G226300 Sobic006G030700--Sobic001G249300 Sobic006G030700--Sobic001G150600 Sobic006G030700--Sobic001G280200 Sobic006G030700--Sobic009G054500 Sobic006G100332 Sobic006G100332 Sobic006G030700--Sobic006G100332 Sobic006G030700--Sobic009G029600 Sobic006G030700--Sobic003G087200 Sobic002G409500--Sobic009G029600 Sobic002G409500--Sobic003G219600 Sobic002G409500--Sobic009G211400 Sobic002G409500--Sobic001G280200 Sobic002G409500--Sobic001G249300 Sobic002G409500--Sobic003G257100 Sobic002G409500--Sobic004G255000 Sobic002G409500--Sobic002G215800 Sobic003G259200 Sobic003G259200 Sobic002G409500--Sobic003G259200
Octagon: transcription factors


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