Gene annotation
Transcriptome id Sobic.003G355600.1
Synonym Sb03g039780
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5XPS5
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF251
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37770 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g62880.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026859
Brachypodium KQK10566
Barley HORVU3Hr1G085780.11 , HORVU3Hr1G085780.13 , HORVU3Hr1G085780.12 , HORVU3Hr1G085780.15 , HORVU3Hr1G085780.14 , HORVU3Hr1G085780.17 , HORVU3Hr1G085780.16 , HORVU3Hr1G085780.19 , HORVU3Hr1G085780.18 , HORVU3Hr1G085780.2 , HORVU3Hr1G085780.30 , HORVU3Hr1G085780.28 , HORVU3Hr1G085780.29 , HORVU3Hr1G085780.24 , HORVU3Hr1G085780.25 , HORVU3Hr1G085780.27 , HORVU3Hr1G085780.20 , HORVU3Hr1G085780.21 , HORVU3Hr1G085780.22 , HORVU3Hr1G085780.23
Wheat TraesCS3D02G357000 , TraesCS7D02G240400 , TraesCS3B02G395700 , TraesCS7B02G136900 , TraesCS7B02G136900 , TraesCS3A02G363500 , TraesCS7A02G241400 , TraesCS7A02G241400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
2 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
3 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
4 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
6 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
7 Sobic.002G009700 AMP-binding domain containing protein, expressed -
8 Sobic.009G193700 transmembrane protein 56, putative, expressed -
9 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
10 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
11 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
12 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
13 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.003G322700 expressed protein -
15 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
16 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
17 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
18 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
19 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
20 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase


Gene co-expression network
sample Sobic003G355600 Sobic003G355600 Sobic008G062200 Sobic008G062200 Sobic003G355600--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic003G355600--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G355600--Sobic002G304000 Sobic009G226300 Sobic009G226300 Sobic003G355600--Sobic009G226300 Sobic010G107000 Sobic010G107000 Sobic003G355600--Sobic010G107000 Sobic006G199000 Sobic006G199000 Sobic003G355600--Sobic006G199000 Sobic002G009700 Sobic002G009700 Sobic003G355600--Sobic002G009700 Sobic009G193700 Sobic009G193700 Sobic003G355600--Sobic009G193700 Sobic004G101900 Sobic004G101900 Sobic003G355600--Sobic004G101900 Sobic008G062200--Sobic003G355600 Sobic008G062200--Sobic009G226300 Sobic008G062200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic008G062200--Sobic009G054500 Sobic004G260000 Sobic004G260000 Sobic008G062200--Sobic004G260000 Sobic008G062200--Sobic001G325200 Sobic008G062200--Sobic004G101900 Sobic008G062200--Sobic009G193700 Sobic003G148800 Sobic003G148800 Sobic008G062200--Sobic003G148800 Sobic007G068100 Sobic007G068100 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic004G321800 Sobic004G321800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic001G325200--Sobic009G054500 Sobic001G015500 Sobic001G015500 Sobic001G325200--Sobic001G015500 Sobic001G325200--Sobic003G355600 Sobic002G304000--Sobic009G226300 Sobic002G304000--Sobic009G054500 Sobic002G304000--Sobic004G101900 Sobic002G304000--Sobic003G148800 Sobic002G215700 Sobic002G215700 Sobic002G304000--Sobic002G215700 Sobic002G304000--Sobic008G062200 Sobic002G304000--Sobic001G325200 Sobic002G304000--Sobic003G355600 Sobic003G105800 Sobic003G105800 Sobic002G304000--Sobic003G105800 Sobic009G226300--Sobic009G054500 Sobic001G249300 Sobic001G249300 Sobic009G226300--Sobic001G249300 Sobic007G187300 Sobic007G187300 Sobic009G226300--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic006G100332 Sobic006G100332 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic009G211400 Sobic009G211400 Sobic010G107000--Sobic009G211400 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic010G107000--Sobic003G355600 Sobic003G219600 Sobic003G219600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic009G029600 Sobic009G029600 Sobic010G107000--Sobic009G029600 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic008G153400 Sobic008G153400 Sobic006G199000--Sobic008G153400 Sobic003G398100 Sobic003G398100 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic002G009700--Sobic003G355600 Sobic009G126900 Sobic009G126900 Sobic002G009700--Sobic009G126900 Sobic010G043400 Sobic010G043400 Sobic002G009700--Sobic010G043400 Sobic002G009700--Sobic008G062200 Sobic003G322700 Sobic003G322700 Sobic002G009700--Sobic003G322700 Sobic003G329400 Sobic003G329400 Sobic002G009700--Sobic003G329400 Sobic006G204900 Sobic006G204900 Sobic002G009700--Sobic006G204900 Sobic002G009700--Sobic009G193700 Sobic007G024700 Sobic007G024700 Sobic002G009700--Sobic007G024700 Sobic009G193700--Sobic010G107000 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic009G193700--Sobic006G199000 Sobic001G089800 Sobic001G089800 Sobic009G193700--Sobic001G089800 Sobic004G101900--Sobic002G304000 Sobic004G101900--Sobic002G215700 Sobic004G101900--Sobic001G325200 Sobic004G101900--Sobic009G226300 Sobic004G101900--Sobic009G054500 Sobic004G101900--Sobic008G062200 Sobic004G101900--Sobic003G148800 Sobic004G124200 Sobic004G124200 Sobic004G101900--Sobic004G124200 Sobic004G101900--Sobic001G015500
Octagon: transcription factors


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