Gene annotation
Transcriptome id Sobic.006G199000.1
Synonym Sb06g027110
Functional annotation pathogenesis-related Bet v I family protein, putative, expressed
UniProt A0A1Z5REP9
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g50710.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G199000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
2 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
3 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
4 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
6 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
7 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
8 Sobic.001G282600 transporter family protein, putative, expressed -
9 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
11 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
12 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
14 Sobic.006G030700 receptor kinase, putative, expressed -
15 Sobic.003G322700 expressed protein -
16 Sobic.009G193700 transmembrane protein 56, putative, expressed -
17 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
18 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
20 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G199000 Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic006G199000--Sobic008G153400 Sobic003G398100 Sobic003G398100 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic003G355600 Sobic003G355600 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic008G153400--Sobic001G150600 Sobic008G153400--Sobic006G199000 Sobic006G030700 Sobic006G030700 Sobic008G153400--Sobic006G030700 Sobic008G153400--Sobic001G325200 Sobic008G153400--Sobic003G398100 Sobic008G153400--Sobic003G257100 Sobic003G087200 Sobic003G087200 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic009G226300 Sobic009G226300 Sobic008G153400--Sobic009G226300 Sobic003G398100--Sobic006G199000 Sobic003G398100--Sobic008G153400 Sobic009G207600 Sobic009G207600 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G398100--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic003G398100--Sobic003G322700 Sobic003G398100--Sobic001G150600 Sobic009G029600 Sobic009G029600 Sobic003G257100--Sobic009G029600 Sobic003G257100--Sobic006G199000 Sobic003G257100--Sobic008G153400 Sobic003G257100--Sobic003G398100 Sobic010G107000 Sobic010G107000 Sobic003G257100--Sobic010G107000 Sobic002G352800 Sobic002G352800 Sobic003G257100--Sobic002G352800 Sobic009G211400 Sobic009G211400 Sobic003G257100--Sobic009G211400 Sobic003G257100--Sobic006G030700 Sobic002G409500 Sobic002G409500 Sobic003G257100--Sobic002G409500 Sobic008G062200 Sobic008G062200 Sobic003G355600--Sobic008G062200 Sobic003G355600--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G355600--Sobic002G304000 Sobic003G355600--Sobic009G226300 Sobic003G355600--Sobic010G107000 Sobic003G355600--Sobic006G199000 Sobic002G009700 Sobic002G009700 Sobic003G355600--Sobic002G009700 Sobic009G193700 Sobic009G193700 Sobic003G355600--Sobic009G193700 Sobic004G101900 Sobic004G101900 Sobic003G355600--Sobic004G101900 Sobic007G068100 Sobic007G068100 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic001G325200--Sobic003G148800 Sobic004G321800 Sobic004G321800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic001G325200--Sobic009G054500 Sobic001G325200--Sobic001G015500 Sobic001G325200--Sobic003G355600 Sobic001G150600--Sobic003G087200 Sobic006G100332 Sobic006G100332 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic001G150600--Sobic006G030700 Sobic001G150600--Sobic009G226300 Sobic001G150600--Sobic003G148800 Sobic001G150600--Sobic001G325200 Sobic001G150600--Sobic009G054500 Sobic001G150600--Sobic004G321800 Sobic001G069900 Sobic001G069900 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic001G015500--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic007G186200 Sobic007G186200 Sobic001G015500--Sobic007G186200 Sobic002G266000 Sobic002G266000 Sobic001G282600--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic001G282600--Sobic006G104600 Sobic001G282600--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic001G282600--Sobic008G153400 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic009G114000 Sobic009G114000 Sobic006G091700--Sobic009G114000 Sobic006G091700--Sobic003G087200 Sobic006G091700--Sobic001G150600 Sobic002G085300 Sobic002G085300 Sobic006G091700--Sobic002G085300 Sobic006G091700--Sobic001G015500 Sobic006G091700--Sobic008G153400 Sobic006G091700--Sobic006G030700 Sobic006G091700--Sobic006G199000 Sobic006G091700--Sobic001G069900
Octagon: transcription factors


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